Protein Info for MPMX19_05773 in Azospirillum sp. SherDot2

Annotation: Putative 1,2-phenylacetyl-CoA epoxidase, subunit D

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 173 PF01883: FeS_assembly_P" amino acids 21 to 91 (71 residues), 49.4 bits, see alignment E=2.1e-17 TIGR02159: phenylacetate-CoA oxygenase, PaaJ subunit" amino acids 28 to 172 (145 residues), 170.6 bits, see alignment E=1.3e-54

Best Hits

KEGG orthology group: K02612, phenylacetic acid degradation protein (inferred from 94% identity to azl:AZL_d01590)

MetaCyc: 45% identical to anthraniloyl-[acp] 1,2-epoxidase subunit K (Streptomyces sp. S4(2010))
1.14.13.-

Predicted SEED Role

"Phenylacetate-CoA oxygenase, PaaJ subunit"

MetaCyc Pathways

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (173 amino acids)

>MPMX19_05773 Putative 1,2-phenylacetyl-CoA epoxidase, subunit D (Azospirillum sp. SherDot2)
MPDAAGCWGPEPGADAVVRAAWDALAGVMDPEIPVLSIVDLGIVRAVSADADGRLSVALT
PTYSGCPATGVIVLEAETALARARLDARVSVVIAPPWTTDWISDTGREKLAEVGIVPPPH
SGKRALTAPDEVIACPRCGSEDTRQISRFGSTACKALHACNACLEPFDVFKCH