Protein Info for MPMX19_05709 in Azospirillum sp. SherDot2

Annotation: hypothetical protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 310 transmembrane" amino acids 17 to 38 (22 residues), see Phobius details amino acids 45 to 63 (19 residues), see Phobius details amino acids 75 to 95 (21 residues), see Phobius details amino acids 107 to 123 (17 residues), see Phobius details amino acids 130 to 148 (19 residues), see Phobius details amino acids 168 to 185 (18 residues), see Phobius details amino acids 197 to 218 (22 residues), see Phobius details amino acids 230 to 248 (19 residues), see Phobius details amino acids 260 to 280 (21 residues), see Phobius details amino acids 286 to 306 (21 residues), see Phobius details PF00892: EamA" amino acids 16 to 147 (132 residues), 54.7 bits, see alignment E=6.1e-19 amino acids 167 to 301 (135 residues), 36 bits, see alignment E=3.8e-13

Best Hits

KEGG orthology group: None (inferred from 91% identity to azl:AZL_d02150)

Predicted SEED Role

"Permease of the drug/metabolite transporter (DMT) superfamily" in subsystem Queuosine-Archaeosine Biosynthesis

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (310 amino acids)

>MPMX19_05709 hypothetical protein (Azospirillum sp. SherDot2)
MTTTATLPDRRSSNRATLVGFIAILLWATLAPLATLAAMVPPFQLVATSFLLAFLVGSGW
TASRGDNPLRYFRQPVAAWALGVGGLFGFHFLYFMALQAAPPVEANLINYLWPLLIVLFS
ALLPGERLRAWHVGGAVAGLAGTALLIARGGTSGSVGGFSIDPAHLPGYAAALGSAVTWA
GYSVLRRRLGQIGEAPTDAVSAFCLVTALLSLLCHLALERTVWPDSAAGWGAMLLLGLGP
VGAAFFVWDYGVRHGDIRALGALSYLAPLLSTLLLVLFGLAANSGIIWVSCALIAGGSLL
ASKDLLRRKA