Protein Info for MPMX19_05701 in Azospirillum sp. SherDot2

Annotation: Putrescine transporter PotE

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 470 transmembrane" amino acids 12 to 32 (21 residues), see Phobius details amino acids 38 to 62 (25 residues), see Phobius details amino acids 91 to 116 (26 residues), see Phobius details amino acids 128 to 147 (20 residues), see Phobius details amino acids 153 to 173 (21 residues), see Phobius details amino acids 193 to 211 (19 residues), see Phobius details amino acids 231 to 252 (22 residues), see Phobius details amino acids 280 to 303 (24 residues), see Phobius details amino acids 330 to 347 (18 residues), see Phobius details amino acids 359 to 382 (24 residues), see Phobius details amino acids 398 to 420 (23 residues), see Phobius details amino acids 425 to 444 (20 residues), see Phobius details TIGR00908: ethanolamine permease" amino acids 6 to 450 (445 residues), 622.7 bits, see alignment E=1.8e-191 PF13520: AA_permease_2" amino acids 14 to 416 (403 residues), 124.8 bits, see alignment E=4.5e-40 PF00324: AA_permease" amino acids 21 to 425 (405 residues), 111 bits, see alignment E=6.2e-36

Best Hits

KEGG orthology group: None (inferred from 97% identity to azl:AZL_d02220)

Predicted SEED Role

"Ethanolamine permease" in subsystem Ethanolamine utilization

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (470 amino acids)

>MPMX19_05701 Putrescine transporter PotE (Azospirillum sp. SherDot2)
MSGNTKPELSKSLSGLHLWGIAVGLVISGEYFGWSYGWAAAGTLGFLVTTILIAAMYTTF
IFSFTELTTAIPHAGGPFAYSYRAFGPKGGFVAGFATLIEFVFAPPAIALAIGAYLNVQF
PGLDPKTAAVGAYILFMGLNIAGVSIAATFELFVTILAIIELVVFMGVVYPGFSWANFTA
NGWAGSPSFSKDALGGIFAAIPFAIWFFLAIEGAAMAAEETKDPKRTVPRAYIGGILTLV
VLAFGTMIFAGGVGDWNALSNINDPLPQAMKAVVGESSGWLHMLVWIGLFGLIASFHGII
MGYSRQIFALSRAGFLPPVLARLHPTRKTPHWAILAGGVIGIAAIYSDELIQIGGQPLTA
NIVTMSVFGAIVMYIMSMAALFRLRTTEPALERPFRAPFYPVFPAISLVLAVLALVTMVY
YNTLVFGLFVALFALGYLFHLATAGMRVKAGASSGLTHMDAFTEARTMVD