Protein Info for MPMX19_05657 in Azospirillum sp. SherDot2

Annotation: Succinyl-CoA:coenzyme A transferase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 502 TIGR03458: succinate CoA transferase" amino acids 14 to 494 (481 residues), 745.6 bits, see alignment E=1.1e-228 PF02550: AcetylCoA_hydro" amino acids 14 to 215 (202 residues), 102 bits, see alignment E=6.8e-33 PF13336: AcetylCoA_hyd_C" amino acids 331 to 458 (128 residues), 130.9 bits, see alignment E=6e-42 PF04223: CitF" amino acids 340 to 433 (94 residues), 27.1 bits, see alignment E=3.2e-10

Best Hits

Swiss-Prot: 51% identical to CAT1_CLOK5: Succinyl-CoA:coenzyme A transferase (cat1) from Clostridium kluyveri (strain ATCC 8527 / DSM 555 / NCIMB 10680)

KEGG orthology group: K01067, acetyl-CoA hydrolase [EC: 3.1.2.1] (inferred from 96% identity to azl:AZL_d02810)

MetaCyc: 51% identical to succinyl-CoA:CoA transferase (Clostridium kluyveri)
RXN-8807 [EC: 2.8.3.18]

Predicted SEED Role

"Acetyl-CoA hydrolase"

MetaCyc Pathways

KEGG Metabolic Maps

Isozymes

No predicted isozymes

Use Curated BLAST to search for 2.8.3.18 or 3.1.2.1

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (502 amino acids)

>MPMX19_05657 Succinyl-CoA:coenzyme A transferase (Azospirillum sp. SherDot2)
MYRDRIRLKSLWGKVVPAEEAAFLIKDGMTVGMSGFTRAGDAKAVPLALAERAASEKLKI
TLMTGASLGNDVDRILTEAGVLSRRLPFQADPVLRKAINRGEVMFVDQHLSETVELLRSR
QMGPVDVAVIEACAITDTGGIVPTTSIGNSATFAILAEKIIIELNLTQPLDLEGMHDVYI
PTRRPFREPIPVVTAESRAGLPYIPIDPSKIAAIVVTRKQDSSASILPPDDETNAIAGHL
IEFFGREVKQGRLGRSLAPLQAGIGTIANAVLHGLIDGPFHDLTMYSEVLQDSTFELFDA
GKLTFASGSSITLSAGKYAEVLPKIGSYKGRLLLRPQEISNHPEVIRRLGVIGINTALEC
DIYGNVNSTHVNGTQMMNGIGGSGDFARNSHLAIFVTKSLAKGGAISSIVPMVTHVDHNE
HDVDVLVTEIGLADLRGLAPRERAETIIRNCVHPSYRELAADYHRRALQRGGHTPHLLEE
AFAWHSRFQQTGSMMPAALAAD