Protein Info for MPMX19_05630 in Azospirillum sp. SherDot2

Annotation: hypothetical protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 431 PF13579: Glyco_trans_4_4" amino acids 49 to 231 (183 residues), 51.7 bits, see alignment E=2.6e-17 PF13439: Glyco_transf_4" amino acids 49 to 236 (188 residues), 44.5 bits, see alignment E=3.5e-15 PF00534: Glycos_transf_1" amino acids 241 to 408 (168 residues), 54.5 bits, see alignment E=2.1e-18 PF13692: Glyco_trans_1_4" amino acids 248 to 394 (147 residues), 49.7 bits, see alignment E=9.6e-17

Best Hits

KEGG orthology group: K03208, colanic acid biosynthesis glycosyl transferase WcaI (inferred from 90% identity to azl:AZL_d02500)

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (431 amino acids)

>MPMX19_05630 hypothetical protein (Azospirillum sp. SherDot2)
MPDDSIHLRPPAFDRPASKASAGTPSLAEVPVPEELLLVAQSYWPEPAGSAPMMTDLATA
FAAAGAETTVLTARPNYPGNKVYDGYADGAQDSKTVEGVLIERLHTIPPAGGGMKARLIH
EGVLHAGFAAARARGRVGRHAAVLSLCPSILSVAIANRFKAPGGRHVAIVHDIQSGLASA
LGMGGKAAVKAIRAMERTALNRADAIVVLSEPMRGVLEELGVTRPIHVIPPHVDADAVHP
LPRPDQPPTALYSGAFARKQGLEQVLDMAGHLAELMPQARIKMRGQGGLEEELKGRARAM
GLGNVIFQPLAPKDQLNEAMAEGDVHLVPQRPEGAAFAMPGKAVTILAAGRPFVSTCLPG
SALATLEAQVGAFLCTPPEEPRAMAEAVAALLSDPARATAMGRRGRAWVEANATRAVALD
RYARLLLGEAA