Protein Info for MPMX19_05615 in Azospirillum sp. SherDot2

Annotation: Adaptive-response sensory-kinase SasA

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 499 transmembrane" amino acids 12 to 34 (23 residues), see Phobius details amino acids 186 to 210 (25 residues), see Phobius details PF05227: CHASE3" amino acids 41 to 173 (133 residues), 104.3 bits, see alignment E=1.1e-33 PF02518: HATPase_c" amino acids 378 to 486 (109 residues), 90.9 bits, see alignment E=1.5e-29 PF14501: HATPase_c_5" amino acids 380 to 472 (93 residues), 26.1 bits, see alignment E=1.4e-09

Best Hits

Predicted SEED Role

"Sensory box histidine kinase"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (499 amino acids)

>MPMX19_05615 Adaptive-response sensory-kinase SasA (Azospirillum sp. SherDot2)
MPTSGSTVTRRALLMLLAAAFALLAIIMMSGWLADSTQRYSRSVSRITALRVAAGTLLSQ
LQDAEIGQRGYLLTEDRQYLKPYEAAVAAVDATIARLHELADDDAGEMHIVDRLVGLAAA
KREELAETIALMEAGRRDDSLAIVRTGRGMRLMDDARRSLDELITPADAQLDTQLRALTG
QARTSGWVAILGGLFILLVVGGAVWIAVGYTRALMQAQRAIQALNDSLEQRVSERTMELQ
RANDEIQRFAYIVSHDLRAPLVNVMGFTSEFEAGLASVAADLDRRPADGDDAMAAEARRA
VAEDMPEAIGFIRTSTTKMDRLINAILALSRQGSRTLNPEPISMQALVENVVASNRHRAG
ELRCAIDIAGPLPSLVSDRLALEQVFGNLLDNAIKYLDPARPGRIAIRGRSEAGVLIFEV
ADNGRGIAAQDHERIFELFRRSGVQDRPGEGIGLAYVRTLVRRLQGDVTVDSVPGQGSIF
RISLPKILALSSEKPAHEA