Protein Info for MPMX19_05610 in Azospirillum sp. SherDot2

Annotation: Efflux pump membrane transporter BepE

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 100 200 300 400 500 600 700 800 900 1024 signal peptide" amino acids 1 to 30 (30 residues), see Phobius details transmembrane" amino acids 334 to 353 (20 residues), see Phobius details amino acids 360 to 381 (22 residues), see Phobius details amino acids 387 to 410 (24 residues), see Phobius details amino acids 431 to 452 (22 residues), see Phobius details amino acids 463 to 486 (24 residues), see Phobius details amino acids 524 to 543 (20 residues), see Phobius details amino acids 847 to 867 (21 residues), see Phobius details amino acids 874 to 894 (21 residues), see Phobius details amino acids 900 to 922 (23 residues), see Phobius details amino acids 949 to 970 (22 residues), see Phobius details amino acids 978 to 1004 (27 residues), see Phobius details PF00873: ACR_tran" amino acids 5 to 1004 (1000 residues), 899.7 bits, see alignment E=2.3e-274 PF03176: MMPL" amino acids 335 to 498 (164 residues), 26.5 bits, see alignment E=3.1e-10 amino acids 845 to 1012 (168 residues), 28.7 bits, see alignment E=6.8e-11

Best Hits

KEGG orthology group: None (inferred from 94% identity to azl:AZL_d02700)

Predicted SEED Role

"RND multidrug efflux transporter; Acriflavin resistance protein"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (1024 amino acids)

>MPMX19_05610 Efflux pump membrane transporter BepE (Azospirillum sp. SherDot2)
MGSFTDIFIRRPVLSLVVSLLILLIGARALLELPIRQYPQLQNTVITVTTSYPGASPELM
QGFIATPIEQAVSSAEGLDYLTSSSTQGQSVVTAYVRLNFDPNVAMTDVMAKVQQVKYQL
PREANDPVILKSTGETTSILYMGFSSPDLSGAAISDYLTRVVQPVLSTVEGVARAQILGG
QTFAMRLWLDPVKMAARNISPADVSAAVAANNYQSAPGQTKGVFVISNVTANTGLTDVEQ
FRDMVVKAKDGALVRMRDIATVELSSKSFDASVAMNGQQAIFIGVDSTPTGNPLNIVADI
RKMEPDLRRNLPPGMNMEIVYDSTRFIQASIDEVVKTLLEAVAIVIVVIFLFLGSLRSVL
IPVVTIPLSIVGAATFMLALGFSLNLLTLLAMVLAIGLVVDDAIVVVENIHRHIEHGKSK
VAASLIGAREIIGPVISMTITLAAVYAPIGLLGGLTGALFREFAFTLAASVIVSGVVALT
LSPMMCSIILKEGEPGRFAAFLDRQFERLAGWYERRLHGMLDYRAATLLFAVGILLSVGY
LFANTMSELAPEEDQGILFGISKGPQYANLDYIDSFGKQIDETFAAFPETDTRFILTGLP
TLNQGFAGMILKPWGERKRSAKELQPLAQAELGKVTGINVFLVSPPALPGSTGGLPVQMV
ISSPGDYRTIFDAIERIKDAATKSGMFIVTDSDLQYDSPVVRLKIDRAKAADLGLTMQSV
SSTLSVLVGGNYVNRFNLNGRSYEVIPQVPRAERLTPESLTNYYVTSGSGAQIPLSTVVS
VETAVEPNALNKYNQLPSATFSAVPMPGVSMGQVVDFLEEQARTQLPAGFNHAYLSESRQ
FVTEGSQLMITFAFALIVIYLVLAAQFESLRDPLVILVSVPMSICGALLPLFFGVATMNI
YTQVGLVTLIGLISKHGILLVEFAREMQLNEGVDRRTAIEHAARVRLRPILMTTAAMVVG
LLPLLTAAGAGAASRFSIGLVIVSGMLIGTLFTLFVLPAVYTLLAKDHYAASRSNRAEQL
RSTT