Protein Info for MPMX19_05589 in Azospirillum sp. SherDot2

Annotation: hypothetical protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 237 PF00106: adh_short" amino acids 12 to 197 (186 residues), 72.4 bits, see alignment E=3.6e-24 PF13561: adh_short_C2" amino acids 16 to 197 (182 residues), 71.3 bits, see alignment E=9.6e-24

Best Hits

KEGG orthology group: None (inferred from 71% identity to pcs:Pc21g08110)

Predicted SEED Role

"Short-chain dehydrogenase/reductase SDR"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (237 amino acids)

>MPMX19_05589 hypothetical protein (Azospirillum sp. SherDot2)
MQHLPTDSHRSILLVGASRGLGHAMAAEFLKKGWSVLGTVRGPNRTELHDLADAHPGRVE
IESLDICMPDQLAALRDRLVGRTFDILFVNAGTANRDPTQTIGEVSTDEFIHVMTTNALG
PMRVIESLERNVTAAGLIGVMSSGQGSIANNLSGQRELYRGSKAALNMFMRSFAARRAGS
GRPLAVMAPGWIRTALGGADAPLSIEDSIPKLVDVLLAKQDRPGLEYLDYQGRTVPW