Protein Info for MPMX19_05553 in Azospirillum sp. SherDot2

Annotation: hypothetical protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 550 600 658 PF00015: MCPsignal" amino acids 165 to 319 (155 residues), 97.7 bits, see alignment E=3.7e-32 amino acids 470 to 614 (145 residues), 77.4 bits, see alignment E=6.3e-26

Best Hits

KEGG orthology group: K03406, methyl-accepting chemotaxis protein (inferred from 87% identity to azl:AZL_d03500)

Predicted SEED Role

"Methyl-accepting chemotaxis protein"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (658 amino acids)

>MPMX19_05553 hypothetical protein (Azospirillum sp. SherDot2)
MALIKKTKIDTARTARTKPGADAADEGPDRSVAVSAAESAPAAATASVPQRRRARADSRR
RQAAAGIAAASTELASGIAQAASAAEELRRAMEQIAAGAEQSAGATQQSQRMIGRASELL
TRSRSTAEQAVLRVEALQATLKDVSGQILSSIEGIVRAAERQEASVRLVRDLEAQAREIG
TIVQSVAAIADQTNLLALNAAIEAARAGEAGKGFAVVADEVQALAERSERSANGIQAMVG
EIQDAVAAIAAGIVASSDAAKAEVERGRRIVEQLEGVRSDMSTLVQGAQETIRAAVEADQ
AAREALRGAETIAASAEEQSAAAEEALRTAGEQALALNQSQRAAGQLSEIAEDLEGTADL
AATADELASAAEELSAAIEEINRGAAQIMTAIGQISGGAQSQSAATHQLASAISEIDAAA
TLAAGRAGESVERCGSMEALLGETRDTIGRLADGMLEAVESSRRAGDRLDALDRIGRRID
KVVDAIATVAIQTGMLAVSGSIEAARAGEFGRGFTVVSGDIRKLAGDSADSAERVKDIVR
DIQDQMLRVRRDVEEVSATAVTEIARHRAFGVTLTASAQELRVVTAGSREILEAATETTG
ALRETRVGVEQVATAAAAANLAGTEAAKAAREQAKGAEELASAIEEIAAMADSLLGAA