Protein Info for MPMX19_05506 in Azospirillum sp. SherDot2

Annotation: Leucine efflux protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 214 transmembrane" amino acids 6 to 26 (21 residues), see Phobius details amino acids 38 to 62 (25 residues), see Phobius details amino acids 69 to 89 (21 residues), see Phobius details amino acids 123 to 143 (21 residues), see Phobius details amino acids 155 to 183 (29 residues), see Phobius details amino acids 194 to 211 (18 residues), see Phobius details PF01810: LysE" amino acids 14 to 209 (196 residues), 113.6 bits, see alignment E=4.2e-37

Best Hits

KEGG orthology group: None (inferred from 59% identity to oan:Oant_0506)

Predicted SEED Role

"L-lysine permease" in subsystem Lysine degradation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Compare to protein structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (214 amino acids)

>MPMX19_05506 Leucine efflux protein (Azospirillum sp. SherDot2)
MPGLSIFIGALAVAYLVPGADMLLLLQTGARQGRRHALATALGLAMARAAHVALAALGLA
ALLQTAPAVFDLVRIAGAAYLVWLGIGVLRMPPLGPAAAGGAAGAQGERGAASYLADILR
GLLTNLLNPKALLFCSVLLPQFIQTDAGGVSGQFAMLGAVLVGVGMAFDSLYALAGAALA
GLVARHRIVEAVQRWSFAALLIGFGLRLAAVQRL