Protein Info for MPMX19_05416 in Azospirillum sp. SherDot2

Annotation: hypothetical protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 100 200 300 400 500 600 700 800 900 1000 1100 1200 1300 1400 1500 1600 1700 1769 transmembrane" amino acids 37 to 57 (21 residues), see Phobius details PF05860: TPS" amino acids 61 to 326 (266 residues), 131.1 bits, see alignment E=1.1e-41 TIGR01901: filamentous hemagglutinin family N-terminal domain" amino acids 93 to 167 (75 residues), 84.1 bits, see alignment (E = 2.4e-28) PF09136: Glucodextran_B" amino acids 1451 to 1518 (68 residues), 30.4 bits, see alignment (E = 4.5e-11) PF00656: Peptidase_C14" amino acids 1533 to 1745 (213 residues), 76.1 bits, see alignment E=5.3e-25

Best Hits

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (1769 amino acids)

>MPMX19_05416 hypothetical protein (Azospirillum sp. SherDot2)
MGVGSVMRGSGRELDVHGRTAVRRDDARRRAALRHSTALAGAARLAILTAVLALPLPALA
NPEGGVVTDGAATIHTTAPGRLDIIQSTPKAVIDWQRFGIAEGEHTNFQQPDASAITLNR
VTGSDPSAILGRLTANGQVWLVNPNGILFGPNARVDVGGLVATTHDIRNADFMAGRYSFE
GRAGSTATVENEGTITVAQAGLAALVAPGVANRGTIQARMGEVTLASGRRFVVDLFGDQK
INIAVDAKTDARPVGADGKPVDALVSNSGKIFADGGRVQMTASAAKGLVDRVVNMSGTVQ
ARRVEQQGGDIVLLGDGGEVEVSGSIDASGSGAGQKGGSVTVSGNRTALTATARITASGP
AGGGEVLIGGDVQGGKASAATLAGYNIRPARKPVPPSIETVVAQGATIAADATDNGKGGK
VVVWADGSTRFDGTVSARGGAAGGNGGFVETSGKLSLHVRGSVDAGAGTGQGVGQGAGQG
MVAGGFWLLDPTDITVAATGGTITADNIQTALNGGTSVTLQTESTGTDAGDITVDQAILK
TAGGDASLTLKAHRNIVVNQSIVSSAGALTLTLNAATGSGNGIVRMAATSGTSPIAITTN
GGAFIVGGGSNPAMKPATGISGGYSPSSDRVGVEFHDTIVSTGAGSILINGDGGENNGDG
NHGIALYDSQLTTGTGSITLNGAGGNGIYYGDNVGVLLSSSALQTGGGAVSITGTEGHGE
SSQGNDTIRITDDSSITVQGNGAIAIRAGANSSRDIQLSGAVIRNGDAPITVESGGNLFL
DYDTSLTSSGAVTLRAASGISLMDSHIVAADRPVTLNSNRGGYGGAISLGSSSIATTGGD
IVLGGGSDPASMAAKAGYDDWAGVSIANSSLYTDRGSISIRGEGEGYSNGTHGVLINGSS
TIGAATGKIAIHGKTTSQSDSRNAGVLIESNDDGGPTVVAGSTAADAILIDGDASEADSI
ESWGVMLQGRVGLLSSGGVSIAGKGGASSADFEVAGIGLDAENDGNIQIVAAAGEVTLQG
TAGTAGPHGTASALYRNGAVTVSSTPAPPPPPPPPPPPPPPPPPPPPVTPPVTDPTPTAP
TTPTTPGTDTGSGGGSDTPSTSTPTTPTTTTPSTGTDTSGTGTTGTGTTGTGTTDTASSG
TGTTTTPSTSGSQSTASASSSVQAALQTVAQIAANPPTTTTGTGSTAATTTGSSATARSS
TGATTGTTGTGTTAGATTPQTLLATLEQGTATRTAEGQGTQSAGGSSASNGAPTSPPPPP
PGPATVVLASGRSVSFTADAAAAYSSGATLSQPGPQLLASPQVQAAAGTLIQAAGNGGMV
QAVTTLATGGLSLPEQRAVLASVPVPTLIGGLTASSDPVAVRVGGILQNSAAGRPGGYAQ
VRAAAAQANLPPQVARTYLAMVQRVEREQRTQAFSGALRQLVANPSAADMFGRPAAASAP
PSLQQARGGRTRGGTMTLRGIVADSANLAEARVNGRWVFIDEQGQFRTSIPVEPGAKEAT
LTMTDEAGKTTEQRIAIDSATSAPDPAAPPKPRKIALMIAVDSYRDGAIPALATPDADIK
AVGKALNDQLGYETRVLRNPTKAQIGEALRKLGREVGEQDQVMVYYAGHGYELAETGTGY
WLPADAETTSARNWVSNNDIGRFLSRMPAKHVMVVSDSCYSGAFTKEQKVDASRLANETE
IRQRRSVMALSSGGDEPVADGEVNSPFAVALKKRVLGLPKDSSGYALYQEVRQDVTSEAP
QTPQYGVIRTAGYDEGGDFLLDLPDRAMN