Protein Info for MPMX19_05413 in Azospirillum sp. SherDot2

Annotation: hypothetical protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 100 200 300 400 500 600 700 800 900 1047 transmembrane" amino acids 18 to 35 (18 residues), see Phobius details amino acids 56 to 80 (25 residues), see Phobius details amino acids 157 to 183 (27 residues), see Phobius details amino acids 225 to 244 (20 residues), see Phobius details amino acids 264 to 291 (28 residues), see Phobius details amino acids 764 to 785 (22 residues), see Phobius details PF00664: ABC_membrane" amino acids 64 to 294 (231 residues), 81.5 bits, see alignment E=8.9e-27 PF00027: cNMP_binding" amino acids 911 to 997 (87 residues), 48.2 bits, see alignment E=8.7e-17

Best Hits

KEGG orthology group: None (inferred from 92% identity to azl:AZL_d04890)

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (1047 amino acids)

>MPMX19_05413 hypothetical protein (Azospirillum sp. SherDot2)
MNRNIFQFIWKHSGRQQILLALLTVASFPVLYASLELPKIIINRALSDPQPEREIFGVAM
GPVTYLLVLCFTFLALVLANGAFKMRINTFKGVVGERQVRRLRFILLDRMLRFPLPHFSK
VSQGELISTVASETEPLAGFIGDSFAQPLYQGGTMLTILLFLFIQQPTIGLVSVALIPVQ
AYIIPKLQLKVKLLGKERVRKVRQLSERIGESVENIREVRVNGTVRYVLAEFSQFLGSIY
WIRLEIYKRKYFVKFLNNFINQITPFFLFSIGGYLVLHGNMTIGALVAALSAFKDLTAPW
KELLDYYQNMIDAQIKYEQIAEQFSPPFLFDWAAPSPATPADLKAPLRLEAVTWANEYGD
RMLQRLSLEVPPGAIVGIAGTNALALRRLAEVLVRLSPPTSGRITIGDRTLDELPLDLLG
RRMAYASPEPRMFTGSMMQNITYGLRHRPPADDPDSMTPARRREIVEAEASGNSTDSMDG
IWTDFGMIGATDWTSLRPWFMQCLAATGGEGAVYQRGLREVFDPDDYPFVAQPLLRARHW
LRDAISERGMDTLLARFERDRFNPYASLAENMLFGLPDGKRLTVARMVCNPTVRALMEAH
GLWDAAVRTGRRFAMRVVGVYRDSDDGDVMIMRYPHIDDALFEELVEAVTRLKRRSERPQ
RRHQEADTLLFATMFLMIVPKRDGMDFAPPQEREAIMAIRRRLLDDMPHELRDKVAVFDP
DLYHPRLNVMDNLLFGRITTEDPRAITQLRALVDEALERTDARAFVLILVALGEVGIGGS
LLPISVRQRVQLIRGLMKKPDIFVIYQALNSYDPEERLRIFQAMKELLPTMTLIVLEERI
SDNPAFDALYDLEEGRLVRRGQNGADQDEDTVPGDGEGTDEPALRLLSRSPVFSDLPETV
LRRLLAASEWRTVAAGDFIYRSGESSEFAFVLAEGEVEQVRLMPDDQPHLHIAYIKPPEV
IGELELLAGVRRFSSFRARTDLRLLRLDGATMLRLLSAAPDLPMRVIQQIGKRLTSEAPA
VPPPAPQIPLPPREREGAQAEPGKGEG