Protein Info for MPMX19_05305 in Azospirillum sp. SherDot2

Annotation: Purine ribonucleoside efflux pump NepI

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 389 transmembrane" amino acids 9 to 31 (23 residues), see Phobius details amino acids 46 to 66 (21 residues), see Phobius details amino acids 77 to 96 (20 residues), see Phobius details amino acids 102 to 124 (23 residues), see Phobius details amino acids 135 to 155 (21 residues), see Phobius details amino acids 165 to 186 (22 residues), see Phobius details amino acids 207 to 229 (23 residues), see Phobius details amino acids 244 to 265 (22 residues), see Phobius details amino acids 272 to 293 (22 residues), see Phobius details amino acids 300 to 320 (21 residues), see Phobius details amino acids 332 to 355 (24 residues), see Phobius details amino acids 361 to 381 (21 residues), see Phobius details PF07690: MFS_1" amino acids 17 to 346 (330 residues), 128.4 bits, see alignment E=3.1e-41 PF00083: Sugar_tr" amino acids 48 to 179 (132 residues), 34.1 bits, see alignment E=1.5e-12

Best Hits

Swiss-Prot: 50% identical to NEPI_SALG2: Purine ribonucleoside efflux pump NepI (nepI) from Salmonella gallinarum (strain 287/91 / NCTC 13346)

KEGG orthology group: None (inferred from 72% identity to rpf:Rpic12D_1448)

Predicted SEED Role

"Arabinose efflux permease"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (389 amino acids)

>MPMX19_05305 Purine ribonucleoside efflux pump NepI (Azospirillum sp. SherDot2)
MSDVTKPAWGAVFAMSMGVFGLVGAEFLPASLLTPMAADLGVSEGLAGQAVTATAVVALV
TSLLIATATRRVDRRTVLLAFSVLLIASNLAVAFAPNLPVLLVGRVLLGIAIGGFWTMAA
ATAMRLVPPDLVPRALSIIFSGVSAATVFAAPLGSYVGGLIGWRPVFLLGAVLGLLALAA
QAATLPRMAPSGDARLRTLLDVLTRPGVGIGMLAVVLVFTGHFAFFTYIRPFLETVTSVG
LDGVSGILLGFGLANFVGTALGGMLLERNMRLTLVVMPLLMALLGLGLASMGGTPAIDTV
LVTLWGLAFGAVPVAWSTWITRAVPDEAESAGGLIVAAVQLAIATGAAAGGAIFGVSGVT
GVFTMAGAVLLIAVLTILLGVRTRMVETA