Protein Info for MPMX19_05279 in Azospirillum sp. SherDot2

Annotation: Copper-containing nitrite reductase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 355 signal peptide" amino acids 1 to 27 (27 residues), see Phobius details TIGR02376: nitrite reductase, copper-containing" amino acids 41 to 343 (303 residues), 341.5 bits, see alignment E=2.7e-106 PF07732: Cu-oxidase_3" amino acids 72 to 183 (112 residues), 50.6 bits, see alignment E=2e-17 PF07731: Cu-oxidase_2" amino acids 86 to 182 (97 residues), 27.3 bits, see alignment E=2.7e-10 amino acids 228 to 330 (103 residues), 20.9 bits, see alignment E=2.6e-08

Best Hits

KEGG orthology group: K00368, nitrite reductase (NO-forming) [EC: 1.7.2.1] (inferred from 96% identity to azl:AZL_c02030)

Predicted SEED Role

"Copper-containing nitrite reductase (EC 1.7.2.1)" in subsystem Denitrification (EC 1.7.2.1)

MetaCyc Pathways

KEGG Metabolic Maps

Isozymes

No predicted isozymes

Use Curated BLAST to search for 1.7.2.1

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (355 amino acids)

>MPMX19_05279 Copper-containing nitrite reductase (Azospirillum sp. SherDot2)
MKTKLSLVTVSAAALMILSGIGAASAADTLYADPKVKQPTVSVVQDPASVPAPEKAGKRA
PKTHKVSLMTTEVESKLDDGTTYTYWTFNNTVPGPMVRVRVGDTVDVSISNAPESTMNHS
VDFHAATGFLGGGQITQVEPGQTKAFSFKALTPGVYVYHCATPMVAHHISKGMYGLIVVE
PEAGLAPVDHEFYVMQQEIYATKAKNLANAEDDYDGLVNERPSYLVFNGTVGALTKDKPL
KAKVGETVRLFFGVGGPNLTSSFHVIGEIFDKVYNLGGLESEPAKGIQTVTVAPGGATMV
EFKVDYPGKYALVDHALSRATKGLIGILEVEGKPDDSIIHDKTGDSRKQLGEMQH