Protein Info for MPMX19_05265 in Azospirillum sp. SherDot2

Annotation: hypothetical protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 209 transmembrane" amino acids 21 to 39 (19 residues), see Phobius details amino acids 51 to 77 (27 residues), see Phobius details amino acids 86 to 104 (19 residues), see Phobius details amino acids 116 to 134 (19 residues), see Phobius details amino acids 155 to 176 (22 residues), see Phobius details amino acids 182 to 199 (18 residues), see Phobius details PF02588: YitT_membrane" amino acids 22 to 196 (175 residues), 104.3 bits, see alignment E=3e-34

Best Hits

KEGG orthology group: None (inferred from 95% identity to azl:AZL_c02150)

Predicted SEED Role

"FIG00445110: hypothetical protein"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (209 amino acids)

>MPMX19_05265 hypothetical protein (Azospirillum sp. SherDot2)
MAATLQAPPAAAERHQLYEDALAMLMGTLFIALGMLIYSKTMLLTGSTAGLALLLSYVTK
VQFGILFFAINLPFYWLAWKRLGWKFTARTFIAVALVTLFSRLTDQWVGFTHLDPVYATV
VGSGLCGTGLLMLFRHRTGLGGVNILAIYLQETYGIRAGYFQLGVDFAILAGAFFVLAPD
RLLLSVLGATIVNVTLAINHKPGRYLGIS