Protein Info for MPMX19_05260 in Azospirillum sp. SherDot2

Annotation: Cobalt-zinc-cadmium resistance protein CzcA

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 100 200 300 400 500 600 700 800 900 1040 signal peptide" amino acids 1 to 34 (34 residues), see Phobius details transmembrane" amino acids 342 to 359 (18 residues), see Phobius details amino acids 365 to 385 (21 residues), see Phobius details amino acids 391 to 415 (25 residues), see Phobius details amino acids 434 to 456 (23 residues), see Phobius details amino acids 467 to 491 (25 residues), see Phobius details amino acids 528 to 549 (22 residues), see Phobius details amino acids 863 to 882 (20 residues), see Phobius details amino acids 889 to 909 (21 residues), see Phobius details amino acids 915 to 936 (22 residues), see Phobius details amino acids 964 to 983 (20 residues), see Phobius details amino acids 989 to 1013 (25 residues), see Phobius details PF00873: ACR_tran" amino acids 10 to 1011 (1002 residues), 532.4 bits, see alignment E=1e-163

Best Hits

KEGG orthology group: None (inferred from 95% identity to azl:AZL_c02200)

Predicted SEED Role

"Acriflavin resistance protein" in subsystem Multidrug Resistance Efflux Pumps

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (1040 amino acids)

>MPMX19_05260 Cobalt-zinc-cadmium resistance protein CzcA (Azospirillum sp. SherDot2)
MNHSRMNLSAWALAHRTLVLFMMLASVLAGALAYKTLGRAEDPSFTFKVMVVRTQWPGAT
AREVEQFVTDRIEKKLEEVPYYDVARSYSKPGESVIFVQLKDSTPPKLVADLWYQVRKKI
GDIRYTLPDGVVGPFFNDEFGDVYSGIYAFMGEDFTPAQLKKVAEQARARLLKLPGVEKI
DLIAPQEERVYVEISSQRLASFGLPVDSVIQALQRENAIAASGDVDTQSQRVYVRLDLGL
DTAAAVRAIPVESGGRLLTIGDVAEVKRGYVEPRRYTLRYNGRDAIGLGVVMAKGGNVLK
LGEQLDVAMEKVRAELPVGLEAVQIADQPKVVEHSVGEFTESLAEALGIVILVSLVSLGW
RTGIVVALAVPLVLAMTLVAMQILHIDLQRISLGALIIALGLLVDDAIIAVEMMVVKMEQ
GWDRLKAGAFAYTSTAFPMLSGTIVTAAGFVPVGFAASAAGEYTNSIFWVVALSLLLSWV
VAVIFTPYLGWLLLPKPKHVVPDGHELDIYDTRAYRILRGMIEACVRARWVTIGVTVAAF
VTSLVGFGHVQQQFFPSASRPELLIDVRLAEGSSFEATAAEVKRMEAVLAKDPDVDYWVA
YTGGGSPRFYLPLDQQLESANFAQFMVMTKGLEEREHFMQRLEPTLDSDFPAARVRIGRL
ENGPPVGYPVQFRVTGEDPATIRKIAYQVRDTMRAHPNTANVHLDWDELSKRIRLEVDTA
KARALGVSKQDLSNALQLLLNGMSVTQYREGTELIGVLLRTTPEERMDLSRLGELNIRTS
RGTTVPLSQVATVRYELEEPVLWRRARETTMTVKGDVTGGLQAPVVSTQLNGQFDALRAT
LPDGYAITMGGAIEESAKGQDSINAMMPVMLLIMVTTLMLQLQSFSRVFMVLLTAPLGLI
GVTASLLLFNLPFGFVAMLGVIALAGIIMRNSVILVDQIEQDIRSGRSRWESIVEATVRR
ARPIALTAAAAILAMIPLTQSVFWGPMAVAIMGGLAGATVLTIFFLPALYAAWFRVPRPE
REEVEDNGLSGALPKPALGD