Protein Info for MPMX19_05212 in Azospirillum sp. SherDot2

Annotation: Beta-barrel assembly-enhancing protease

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 550 600 650 700 769 PF13432: TPR_16" amino acids 49 to 104 (56 residues), 27.3 bits, see alignment 2.3e-09 amino acids 81 to 145 (65 residues), 20.2 bits, see alignment E=3.9e-07 amino acids 219 to 278 (60 residues), 33.5 bits, see alignment 2.7e-11 amino acids 264 to 314 (51 residues), 21.2 bits, see alignment 1.9e-07 amino acids 286 to 346 (61 residues), 16 bits, see alignment 8.1e-06 PF13424: TPR_12" amino acids 212 to 277 (66 residues), 40.9 bits, see alignment E=1.1e-13 PF13181: TPR_8" amino acids 215 to 246 (32 residues), 16.6 bits, see alignment (E = 3.9e-06) amino acids 282 to 312 (31 residues), 12.4 bits, see alignment (E = 8.6e-05) PF13374: TPR_10" amino acids 218 to 242 (25 residues), 15 bits, see alignment (E = 1.1e-05) amino acids 247 to 275 (29 residues), 17.5 bits, see alignment (E = 1.8e-06) amino acids 284 to 310 (27 residues), 15.6 bits, see alignment (E = 7.3e-06) PF14559: TPR_19" amino acids 227 to 278 (52 residues), 26.4 bits, see alignment 3.9e-09 PF13431: TPR_17" amino acids 236 to 267 (32 residues), 22.6 bits, see alignment (E = 4.8e-08) PF07719: TPR_2" amino acids 315 to 347 (33 residues), 24 bits, see alignment (E = 1.6e-08) PF00515: TPR_1" amino acids 315 to 347 (33 residues), 31.1 bits, see alignment (E = 8.1e-11)

Best Hits

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (769 amino acids)

>MPMX19_05212 Beta-barrel assembly-enhancing protease (Azospirillum sp. SherDot2)
MDGNATRRTDGLLRLAVQHHNAGQTERAERFYREILRIDPTHGDAAHLLGHIAFQDGRRT
DATRLFDTAARSNALVGSYHLALGQALMEEGRVTAAFASARRALAVNPDDADALCLLGAI
AGRQARPVPALRCYRAAARLVPGAAEPRLGMGRALEDLRQAGAAIGCYRLAARLRPQDAA
TRVTLANALRRWGAVAEAATAYREAIGLGADTGSVWANLGAALQGTGRLAEAESAYGEAL
RRQPDHAETRNNLGLLLHALGRHAEARGRFRTALALDPCHVPALVNLGLAEAALGEYGRA
ERWQRRAIARDPGQAEAWNNLGNACKAQVRPVEAEACWKRALALNPAFADALGNLGADLS
DREAFAPATVQVRRAIRLMPGHAPMHAVLAYALNGAQRPVEADAACRRALALAPSLADPL
CTLGLAEQRQGRADAGRWFERAVAATPGHALARFNRGLLSLERGALSAGWADYAFRFKAG
RVRPERRFTIPEWTGEPLAGKRLFVWREQGVGDEFLFASCYPDLIKMAGHVVIECERRLV
PLFARSFPKATLRAEQPPCGLMEAETVDCDYHIPAGSVPRLLRERLSAFPTRSCWLFAQG
GRVADWRERLDGAGDNLRVGISWRSQVMTADRRNAYLPLDAWGSVFSVPGVTFVNLQYDE
CQREILAAERRFGQPIYGWTGLDLRDDFEETAALVSTLDLVIAPANSVAELAGALGVPVW
RFGHRDWTQLGTAGRPWYPSMRLFQPLGGQGLEQALERIAAELRRVVAN