Protein Info for MPMX19_05149 in Azospirillum sp. SherDot2

Annotation: hypothetical protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 574 transmembrane" amino acids 29 to 55 (27 residues), see Phobius details amino acids 63 to 81 (19 residues), see Phobius details amino acids 88 to 109 (22 residues), see Phobius details amino acids 120 to 143 (24 residues), see Phobius details amino acids 160 to 184 (25 residues), see Phobius details amino acids 214 to 235 (22 residues), see Phobius details amino acids 260 to 283 (24 residues), see Phobius details amino acids 310 to 338 (29 residues), see Phobius details amino acids 368 to 387 (20 residues), see Phobius details amino acids 399 to 422 (24 residues), see Phobius details amino acids 432 to 452 (21 residues), see Phobius details amino acids 493 to 516 (24 residues), see Phobius details amino acids 537 to 559 (23 residues), see Phobius details TIGR03262: putative 2-aminoethylphosphonate ABC transporter, permease protein" amino acids 35 to 573 (539 residues), 806.4 bits, see alignment E=6.7e-247 PF00528: BPD_transp_1" amino acids 114 to 286 (173 residues), 44.5 bits, see alignment E=7.5e-16 amino acids 396 to 564 (169 residues), 40.6 bits, see alignment E=1.2e-14

Best Hits

KEGG orthology group: K02011, iron(III) transport system permease protein (inferred from 94% identity to azl:AZL_a10510)

Predicted SEED Role

"Ferric iron ABC transporter, permease protein" in subsystem Campylobacter Iron Metabolism or Iron acquisition in Vibrio or Transport of Iron

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (574 amino acids)

>MPMX19_05149 hypothetical protein (Azospirillum sp. SherDot2)
MSMLKVAAPKPSFFTVRQSGRPVDPGERWLFGLGMGGIALFLALFVLLPLCMLFLRSVYD
RDGAFVGLANFAAFLEAPTLVRSVVNSLTLSLLTTVITVTLAFLYAFCLTRTHMAGKGLF
RLLAQIPLLAPSLLPAIALVYLFGNKGILRGLLMGESIYGPIGIVIGEVFYAFPHAVMIL
TVALSTSDARLYEAAEALGAGAWKRFVTITLPGVRYGLISAIFVVFTLVVTDFGVPKVIG
GFTNMLATDVYKQVVGLQNFGMGAVVGIVLLLPAVLAFVADWFGQRRQMAQLSARSVPFQ
PRVNPVGDRLAALFCALVGGLLFGLLGVAGFASIVTFWPYNLTPTLANYDFAEFDAAGWS
SYANSLTLAFWTALTGTVIVFTGAWLVERAPGRAAMKGIVRLLAILPLAVPGMVLGLAYI
FFFNAPWNPLGWLYHGMAILVLATVAHFYTVSHLTAVTALKQLDAEFEAVSASLKVPVWS
TFLRVTVPLCLPAILDIAIYFFVNAMTTVSAVVFLYAPETKPASVAVLNMDDAGEVAGAA
AMAMMIVLTSAAVRALHALLSRALQARTQAWRRH