Protein Info for MPMX19_05098 in Azospirillum sp. SherDot2

Annotation: Arginine transport system permease protein ArtQ

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 215 transmembrane" amino acids 12 to 41 (30 residues), see Phobius details amino acids 53 to 76 (24 residues), see Phobius details amino acids 85 to 103 (19 residues), see Phobius details amino acids 146 to 166 (21 residues), see Phobius details amino acids 186 to 208 (23 residues), see Phobius details TIGR01726: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family" amino acids 10 to 107 (98 residues), 101.2 bits, see alignment E=1.9e-33 PF00528: BPD_transp_1" amino acids 39 to 213 (175 residues), 72.1 bits, see alignment E=2.5e-24

Best Hits

Swiss-Prot: 39% identical to GLNP_ECO57: Glutamine transport system permease protein GlnP (glnP) from Escherichia coli O157:H7

KEGG orthology group: K10037, glutamine transport system permease protein (inferred from 98% identity to azl:AZL_a10150)

MetaCyc: 39% identical to L-glutamine ABC transporter membrane subunit (Escherichia coli K-12 substr. MG1655)
ABC-12-RXN [EC: 7.4.2.1]

Predicted SEED Role

"polar amino acid ABC transporter, inner membrane subunit"

Isozymes

No predicted isozymes

Use Curated BLAST to search for 7.4.2.1

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Compare to protein structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (215 amino acids)

>MPMX19_05098 Arginine transport system permease protein ArtQ (Azospirillum sp. SherDot2)
MKFSVIIDAFPYLLGAAVTTIWVSLLGVLLGQVIGVVVCVARQSGGRAADMAGGVYVSFF
RGVPLLIQLLLIYYMLPLIGIDVPPLVASIAALGLASGAYVSEIYRGALNAVPHGQSEAA
LALGFPGSSIWTRILLPQAFRISVPALVNELILLLKASSLISVVGVAELTRTSQTISASN
YRPLEIYLAAGLIYLAINGALALFGTLVERRLQQA