Protein Info for MPMX19_04976 in Azospirillum sp. SherDot2

Annotation: hypothetical protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 316 transmembrane" amino acids 20 to 44 (25 residues), see Phobius details amino acids 56 to 76 (21 residues), see Phobius details amino acids 88 to 109 (22 residues), see Phobius details amino acids 116 to 139 (24 residues), see Phobius details amino acids 145 to 167 (23 residues), see Phobius details amino acids 179 to 200 (22 residues), see Phobius details amino acids 206 to 226 (21 residues), see Phobius details amino acids 238 to 256 (19 residues), see Phobius details amino acids 262 to 282 (21 residues), see Phobius details amino acids 293 to 315 (23 residues), see Phobius details PF03547: Mem_trans" amino acids 31 to 155 (125 residues), 26.5 bits, see alignment E=1.2e-10 amino acids 173 to 308 (136 residues), 48.2 bits, see alignment E=3.1e-17

Best Hits

KEGG orthology group: K07088, (no description) (inferred from 96% identity to azl:AZL_c05180)

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (316 amino acids)

>MPMX19_04976 hypothetical protein (Azospirillum sp. SherDot2)
MVTDSLPTPRLQHRVPPASMPISALLSDAFAVLAPVFVVAALGYGWTRGKLPYDSAFITT
FAINVSSPCLVFSALTRLHLSADVMGEMALAATLCMALTALASVPVLLASGLSLRVYVPA
MAFPNAGNLGLPVCLFAFGENGLSLAVLFYAVMSVGQFTLGPALAAGRFDLGQMARTPTI
YAVAAAVAIQLSGLPLPVWIGNTTTLLGNCAVPLMLFSLGVALSKLRLSGAVRALSMSAF
RLAVGFAMGLLVAWAMGLTGAARGVVLVQSSMPVAVFNYLWALRYGNAPEDVAGMVLGST
AMAFVGLPALLMFVMQ