Protein Info for MPMX19_04821 in Azospirillum sp. SherDot2

Annotation: hypothetical protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 550 600 650 716 signal peptide" amino acids 1 to 32 (32 residues), see Phobius details transmembrane" amino acids 347 to 366 (20 residues), see Phobius details PF00672: HAMP" amino acids 364 to 415 (52 residues), 29.8 bits, see alignment 6.4e-11 PF00015: MCPsignal" amino acids 532 to 680 (149 residues), 95.7 bits, see alignment E=3.1e-31

Best Hits

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (716 amino acids)

>MPMX19_04821 hypothetical protein (Azospirillum sp. SherDot2)
MNRLLLRHKIPGAVVGSAVLTALLLGSFAYSAATDRLRTAAQDKLVALADARATSVQSYL
EGLEGDIVLTANTRSMRDAAVALGNGWRIEGDRGDPGTLLRKRYVDDNPNPPAERYKMEK
PEGSTMYDMAHLRLHSWMTDLMLRRGLADVLLLSQDGTVLYSAAKGGDFGKPAADGPLAA
LADSVKRDPKPDEARAADFSAYAPAGGAPSAFLATPVALRQPDGSVQILATLVFRIEPGG
LDRIMRATGGMGDSGDTFLVGEDGKLRSTPRFATGPAVLKPYEGGAMGVIKSDPDHTGVV
EATNISGDGPALTAYRPMTHNGIQWLVLAEAGVDEILAPVRSMRDNMIGAGAALLLVICL
GGILFARGITRPLSSMCDAMQRLAQGERALAVPAQERHDEIGRMAGAMQIFKEALIKADD
LHAEQERVRALREERTRQLERVTDGFDARVGGIVRAVASAAGGLEVTARSMSDGADRTLH
EATSVAAAADQTASNVGTVASAANQLRASIGDIGRHIEESGRITQAAIGAAAQAGETMRA
VVETAGRIGTVVQLIHDIAAQTNLLALNATIEAARAGEAGKGFAVVANEVKHLAAQTAKA
TDEIGSQIGTMQSVTDGAAASIGQIATVIEDMGRISSIVAGAIDEQGTATMDIAANAEQA
AKATQSVTAIIDGVARSADTTKTVAGEVLVSSQDLTRQAGHLRAEIERFLADIKAA