Protein Info for MPMX19_04794 in Azospirillum sp. SherDot2

Annotation: hypothetical protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 468 transmembrane" amino acids 18 to 46 (29 residues), see Phobius details amino acids 58 to 83 (26 residues), see Phobius details amino acids 91 to 114 (24 residues), see Phobius details amino acids 123 to 141 (19 residues), see Phobius details amino acids 148 to 171 (24 residues), see Phobius details amino acids 191 to 211 (21 residues), see Phobius details amino acids 218 to 241 (24 residues), see Phobius details amino acids 257 to 279 (23 residues), see Phobius details amino acids 353 to 374 (22 residues), see Phobius details amino acids 390 to 409 (20 residues), see Phobius details amino acids 416 to 433 (18 residues), see Phobius details

Best Hits

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Compare to protein structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (468 amino acids)

>MPMX19_04794 hypothetical protein (Azospirillum sp. SherDot2)
MDGEFFQQFFSTMQGPAAVLGFSVLAASATVLWEVGVVAVLAMSLLETQLGIDLGFQVAG
YTVSPFDLVAMGLLIAAFFRILVAGRMTGFQFLWLVILGYGFLCFAVGVGSFGLQPAVSF
YRQHFYVLAALSYSLTVAWTPPRLGRLVQIWLIAGTALAALAAGEWLLGGVIPRGRDWTQ
GSLYAFDQVRVLPAASALILAQAGLAGLAVWSQIRSSLVVRVLSIVLLIVSLSLFHRSVW
GATFAGLGALLASSRQWLTRFAPFLLLGSVGLALLWMLYQGMGDNLLTLALQSAIEEPFT
TESSLGWRITGWKLLLERVYSSGWPTILFGAGYGAGYERQIGWTTVFQSPHNFYIAMLLD
TGLVGVGLWVYGFARIAAGLLARLPAGLAEWRPCLVSLLATIVIYDIPYNHLSEQGVWLG
ALAGIAAAGGAAVRSPGGSPVAWATGARTPATVPLGRESPGGVATGRP