Protein Info for MPMX19_04697 in Azospirillum sp. SherDot2

Annotation: NAD(P)H-quinone oxidoreductase subunit 2, chloroplastic

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 550 600 650 700 750 800 850 900 950 988 transmembrane" amino acids 6 to 24 (19 residues), see Phobius details amino acids 31 to 51 (21 residues), see Phobius details amino acids 81 to 101 (21 residues), see Phobius details amino acids 112 to 131 (20 residues), see Phobius details amino acids 137 to 154 (18 residues), see Phobius details amino acids 166 to 189 (24 residues), see Phobius details amino acids 209 to 234 (26 residues), see Phobius details amino acids 246 to 267 (22 residues), see Phobius details amino acids 274 to 295 (22 residues), see Phobius details amino acids 302 to 320 (19 residues), see Phobius details amino acids 326 to 350 (25 residues), see Phobius details amino acids 371 to 390 (20 residues), see Phobius details amino acids 411 to 432 (22 residues), see Phobius details amino acids 460 to 483 (24 residues), see Phobius details amino acids 504 to 526 (23 residues), see Phobius details amino acids 579 to 598 (20 residues), see Phobius details amino acids 611 to 629 (19 residues), see Phobius details amino acids 636 to 656 (21 residues), see Phobius details amino acids 662 to 683 (22 residues), see Phobius details amino acids 704 to 725 (22 residues), see Phobius details amino acids 763 to 781 (19 residues), see Phobius details amino acids 819 to 842 (24 residues), see Phobius details amino acids 850 to 870 (21 residues), see Phobius details amino acids 884 to 904 (21 residues), see Phobius details amino acids 925 to 951 (27 residues), see Phobius details PF00662: Proton_antipo_N" amino acids 66 to 114 (49 residues), 38 bits, see alignment 3.2e-13 PF00361: Proton_antipo_M" amino acids 130 to 411 (282 residues), 210.7 bits, see alignment E=7.1e-66 PF13244: MbhD" amino acids 621 to 685 (65 residues), 72.5 bits, see alignment 6.6e-24 PF20501: MbhE" amino acids 702 to 798 (97 residues), 142.5 bits, see alignment E=9e-46 PF04039: MnhB" amino acids 823 to 945 (123 residues), 122.4 bits, see alignment E=3.5e-39

Best Hits

KEGG orthology group: K05559, multicomponent K+:H+ antiporter subunit A (inferred from 95% identity to azl:AZL_c01200)

Predicted SEED Role

"Na(+) H(+) antiporter subunit A; Na(+) H(+) antiporter subunit B"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (988 amino acids)

>MPMX19_04697 NAD(P)H-quinone oxidoreductase subunit 2, chloroplastic (Azospirillum sp. SherDot2)
MPDALPLLIAIALPFVGAVAAGLLPTHARNAAAWLAGGVALLGLAMVWAAYPTVSAGGVL
RFTAGWMPSLGLDFSLRMDGFAWLFAGLVFGVGALVVVYARYYMAAEDPVPRFFAFLLAF
MGSMTGVVLSGNLIQLAFFWELTSLFSFLLIGYWHHTAAARDGARMALTVTATGGLCLFA
GVLILGHIVGSYELDAVLAAGDLIRAHPLYLPALVLILLGALTKSAQFPFHFWLPHAMAA
PTPVSAYLHSATLVKAGVFLMARLWPVLAGTEAWFWIVGSAGLATLLLGAYVAIFQHDLK
GLLAYSTISHLGLITLLLGLNSELAMVAAIFHVINHATFKASLFMAAGIIDHETGTRDIR
RLSGLNRFMPFTARLALIAAGAMAGVPLLNGFLSKEMFFAEALSAKDPLPVFFDILPVAA
MVASAFSVAYSLRFIHGTFFGPDPVDLPHKPHEPPAWMRFPVEVLVLACIVIGILPAATV
GPYLDMAARAALGAATPEYSLAVWHGFNLPLVMSMAAFAAGLILYRLLQSHLAKGIEGPP
LIRSLEGRRMFERTMVFLSWRLARTAEGVLGTRRLQPQLRLVVAAAVLAAGWTVWTRGVG
PGNLVPSGIDPVLALIWLLGAACALGAAWQAKFHRLAALILLGGTGLVVCVTFVWFSAPD
LALTQLLVEVVTTILLLLGLRWLPKRMGGAGGRGSEAVTLTRRLRDLGIAVAAGAGMAGL
AFGVMTRFPPELLARHFLELAYSEGGGTNVVNVILVDFRGFDTMGEIAVLGVVAMTAYAL
LRRFRPASDSVDVPEQQRDQSAFDASRPDRKDGDTVADWLFIPSLIARLLFPVILLVALF
LLLRGHDLPGGGFAAGLTVAIAMILQYMFGGTQWVEARLRVLPMRWMGIGLLLAAGTGLG
AWMFDRPFLTSYFAYSQIPVLGKVPVASALLFDIGVFALVVGATILILIALARQSLRGHR
AAAPRPPEVPAVPEPVATPLGQTAVGDD