Protein Info for MPMX19_04673 in Azospirillum sp. SherDot2

Annotation: Purine ribonucleoside efflux pump NepI

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 405 transmembrane" amino acids 18 to 38 (21 residues), see Phobius details amino acids 58 to 79 (22 residues), see Phobius details amino acids 87 to 105 (19 residues), see Phobius details amino acids 112 to 134 (23 residues), see Phobius details amino acids 146 to 167 (22 residues), see Phobius details amino acids 175 to 196 (22 residues), see Phobius details amino acids 217 to 239 (23 residues), see Phobius details amino acids 253 to 275 (23 residues), see Phobius details amino acids 283 to 301 (19 residues), see Phobius details amino acids 307 to 330 (24 residues), see Phobius details amino acids 342 to 364 (23 residues), see Phobius details amino acids 371 to 391 (21 residues), see Phobius details PF07690: MFS_1" amino acids 25 to 338 (314 residues), 120.8 bits, see alignment E=3.2e-39

Best Hits

Swiss-Prot: 61% identical to OPDE_PSEAE: Transcription regulatory protein OpdE (opdE) from Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)

KEGG orthology group: None (inferred from 70% identity to rsl:RPSI07_mp0934)

Predicted SEED Role

"Arabinose efflux permease"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (405 amino acids)

>MPMX19_04673 Purine ribonucleoside efflux pump NepI (Azospirillum sp. SherDot2)
MQTHVSSDADRTAPQPAAWGAVFALSLGAFALVASEFMPVSLLTPIASELHITEGQAGQA
ISVSGAFAMLTSLFISSLAGSLDRKHLLLGLTVLMILSGTIVAAAPDYPTFMAGRALIGV
AIGGFWSMSAATAMRLVPDRQVPRALAVLNGGNALATVVAAPMGSFLGGLIGWRGAFFLV
VPVAAIVLVWQAVSLPSMRTESRSSPVTVFRLMGRPVVALGMIAVSVFFMGQFTLFTYLR
PFLETVAHVDVSTLSFMLLAMGAAGFVGTTLIGGFLKTGLYRTLIVIPALMALIALLLVA
VDWSLPMTALLLACWGLFATSAPVGWWTWVARTLPRDAEAGGGLMVAIVQLAITLGAVVG
GLLFDTSGHRATFGASAAMLALAALLAAFTSRAAWKRTPADGNRS