Protein Info for MPMX19_04604 in Azospirillum sp. SherDot2

Annotation: Mannuronan C5-epimerase AlgE5

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 404 PF00353: HemolysinCabind" amino acids 29 to 64 (36 residues), 32.1 bits, see alignment 4.5e-12 amino acids 48 to 77 (30 residues), 22.6 bits, see alignment (E = 4.4e-09) amino acids 120 to 154 (35 residues), 32 bits, see alignment 4.8e-12 amino acids 138 to 171 (34 residues), 22.7 bits, see alignment 3.9e-09 amino acids 211 to 244 (34 residues), 27 bits, see alignment 1.8e-10 amino acids 292 to 327 (36 residues), 39.8 bits, see alignment 1.8e-14 amino acids 317 to 337 (21 residues), 18 bits, see alignment (E = 1.2e-07)

Best Hits

Predicted SEED Role

"Alkaline phosphatase (EC 3.1.3.1)" in subsystem Phosphate metabolism (EC 3.1.3.1)

MetaCyc Pathways

KEGG Metabolic Maps

Isozymes

Compare fitness of predicted isozymes for: 3.1.3.1

Use Curated BLAST to search for 3.1.3.1

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (404 amino acids)

>MPMX19_04604 Mannuronan C5-epimerase AlgE5 (Azospirillum sp. SherDot2)
MQSSISHTLLADFENLTLTGSAALTGTGTGTAANNLLIGNSGANLLTGLEGDDTLNGGSG
PDTLVGGTGNDLYVVDSAGDVVVELEGEGTDTVNASVSWTLGANVENLTLTGSAAINASG
NALDNLLTGGLGNDTLSGGDGADTLDGGAGSNLLIGGAGNDVYLVGGFGDQVVELAGEGI
DEVRTALTGYILTEGVEALTYTGMAAFAGTGNVLDNLIAGGAGANTLDGGFGADTLIGGL
GDDVYVVDSVGDTVIEGADAGIDEVRTTLSAFTLADNVERLVLQGGGDASGIGNGLDNWL
VGNAGNDTLDGGAGNDTLLGGLGNDVLTGGSGADLFAFVSGDSQDTITDFDAAQGDRIGL
AAGQSYSVDTNGNGDAVIVYGTSDIVTLAGIQPAAVSSAWFVTL