Protein Info for MPMX19_04510 in Azospirillum sp. SherDot2

Annotation: hypothetical protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 570 transmembrane" amino acids 20 to 45 (26 residues), see Phobius details amino acids 75 to 95 (21 residues), see Phobius details amino acids 106 to 130 (25 residues), see Phobius details amino acids 154 to 175 (22 residues), see Phobius details amino acids 202 to 223 (22 residues), see Phobius details amino acids 255 to 278 (24 residues), see Phobius details amino acids 304 to 333 (30 residues), see Phobius details amino acids 362 to 384 (23 residues), see Phobius details amino acids 396 to 415 (20 residues), see Phobius details amino acids 425 to 442 (18 residues), see Phobius details amino acids 482 to 507 (26 residues), see Phobius details amino acids 537 to 558 (22 residues), see Phobius details PF00528: BPD_transp_1" amino acids 90 to 275 (186 residues), 48.9 bits, see alignment E=3.5e-17 amino acids 374 to 564 (191 residues), 50.7 bits, see alignment E=9.4e-18

Best Hits

KEGG orthology group: K02011, iron(III) transport system permease protein (inferred from 76% identity to sno:Snov_4304)

Predicted SEED Role

"Ferric iron ABC transporter, permease protein" in subsystem Campylobacter Iron Metabolism or Iron acquisition in Vibrio or Transport of Iron

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (570 amino acids)

>MPMX19_04510 hypothetical protein (Azospirillum sp. SherDot2)
MTSLALTRDRIARVRPGPALAALLIAAFLLLFLVVPVVQVIFVAFQDKTTGAFTLVNFAD
FFQNDLFMRSFGNSFYVSAMSVVVASLLALPLAYLTTRFEFRGSVLIQSLGIIPLIMPPF
IGAVAMQLLFGRNGSVNLLLRDHFGFSIPFMEGLNGVIFVQSIHYFPFILINLSASLKNI
DRAMEESAQNLGCHGFRLFRRIVFPLAMPGYVAGASLVFIKVFDDLGTPLLLNVNDMLAP
QAYLRISSIGIADPMGYVISVVLIACSLLALWVSALAMRGKDYATVQRGGGGLAKRRLKP
LEMVAAYGIVLLILVLVLAPHVGLGLLSFATIWSFSPLPDAFTLKHYHTVFSESGQYITN
TLLYASLAALLDVVIGTAIAYLVLRTKLPGRQWLDYIAMAALAVPGVVLGIGYLRSFYGV
PMPFTGQPLSNFWLILVFALAIRRLPYALRACTAALQQVSSSLEEAAENLGATKLRTVGR
IVVPLMSGGILAGFVTSFATAAVELSATIMLVHSQSDAPLAYGLYVYMQSAAGRGPGAAL
GIFAVIIVGLGTYLSHVVIERGRRDRGQDH