Protein Info for MPMX19_04452 in Azospirillum sp. SherDot2

Annotation: Oxalate:formate antiporter

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 434 transmembrane" amino acids 20 to 40 (21 residues), see Phobius details amino acids 53 to 72 (20 residues), see Phobius details amino acids 83 to 102 (20 residues), see Phobius details amino acids 108 to 129 (22 residues), see Phobius details amino acids 141 to 162 (22 residues), see Phobius details amino acids 174 to 192 (19 residues), see Phobius details amino acids 224 to 246 (23 residues), see Phobius details amino acids 258 to 280 (23 residues), see Phobius details amino acids 300 to 318 (19 residues), see Phobius details amino acids 324 to 343 (20 residues), see Phobius details amino acids 361 to 381 (21 residues), see Phobius details amino acids 387 to 409 (23 residues), see Phobius details TIGR04259: oxalate/formate antiporter" amino acids 16 to 419 (404 residues), 656.8 bits, see alignment E=5.6e-202 PF07690: MFS_1" amino acids 26 to 273 (248 residues), 91.9 bits, see alignment E=2e-30 amino acids 265 to 415 (151 residues), 45 bits, see alignment E=3.7e-16

Best Hits

KEGG orthology group: K08177, MFS transporter, OFA family, oxalate/formate antiporter (inferred from 96% identity to azl:AZL_a03370)

Predicted SEED Role

"oxalate/formate antiporter"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Compare to protein structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (434 amino acids)

>MPMX19_04452 Oxalate:formate antiporter (Azospirillum sp. SherDot2)
MQHTNSEAQGAPLGGRWMQLVIGVICMSMIANLQYGWTLFVNPIDEKYHWGRAAIQIAFT
IFVVTETWLVPVEGWFVDKFGPRIVVVVGGILCALAWVINSFADSLALLYIGAAVGGVGA
GAVYGTCVGNALKWFPDRRGLAAGLTAAGFGAGSALTVVPIANMIQTSGFEQTFLVFGLG
QGLIVFALAWFLKEADPALLPKTKSNIAQSRRNYTPQETLKSPVFWVMYLMFVMVAAGGL
MATAQLGPIAKDFHLDGMPVSIMGLTLPALTFALTIDRVLNGVTRPFFGWVSDHIGRENT
MFVAFAIEAVGILALNQWGQHPVAFVVLTGLVFFAWGEIYSLFPSCCADSFGSKFATTNA
GLLYTAKGTASLVVPFANVIVSSTGSWQAVFFFAAAVNAIAAFMALFVLKPMRARQIAED
TTQPVGKLVTEGAD