Protein Info for MPMX19_04371 in Azospirillum sp. SherDot2

Annotation: Anhydromuropeptide permease

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 454 transmembrane" amino acids 26 to 49 (24 residues), see Phobius details amino acids 59 to 77 (19 residues), see Phobius details amino acids 98 to 117 (20 residues), see Phobius details amino acids 123 to 146 (24 residues), see Phobius details amino acids 159 to 183 (25 residues), see Phobius details amino acids 190 to 209 (20 residues), see Phobius details amino acids 238 to 256 (19 residues), see Phobius details amino acids 262 to 283 (22 residues), see Phobius details amino acids 302 to 321 (20 residues), see Phobius details amino acids 327 to 348 (22 residues), see Phobius details amino acids 355 to 379 (25 residues), see Phobius details amino acids 418 to 440 (23 residues), see Phobius details PF13000: Acatn" amino acids 30 to 106 (77 residues), 42 bits, see alignment E=5e-15 PF07690: MFS_1" amino acids 30 to 290 (261 residues), 67.1 bits, see alignment E=1.4e-22

Best Hits

KEGG orthology group: K08218, MFS transporter, PAT family, beta-lactamase induction signal transducer AmpG (inferred from 92% identity to azl:AZL_a04080)

Predicted SEED Role

"AmpG permease"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Compare to protein structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (454 amino acids)

>MPMX19_04371 Anhydromuropeptide permease (Azospirillum sp. SherDot2)
MKPTSWRTTRLSSWGQALAVYRDPRVLAILFLGFSEGLPLALTGATLNVWLTEQGVSRTN
IGLFALVTMPYALKFLWAPLIDRLRLPVMTRLFGRRRGWALTAQAALIAALLGLGGTDPG
QDLWWTAMCAVLVAFCSASQDIVVDAYRVEVLEENQQAAGAAVLVLGYRFGMMAAGAGAL
YIAEFHGWRTAYEVMAGLVLVGMATVLLCREPKEPPPNAREKLIAEWLGHRPHLSGRSAV
FLAWIYGAVVAPFAQFMERRGWVVVLAFIASYKLGEVLAGQMSSTFYISLGFTKVEIANV
SKLFGLWATIAGGLLGGLLVGKVGVLRGLMIGGILQMVSNFGYVVLAWSGNDVSMLAVTV
AVENVCGGIATSAFVAYLSSLCNVAYTATQYALLSSLYKLGGDLFGASSGWLAERMDWVS
FFLLSMAGAIPALCLLIWLMGLHRREEEAAVPAQ