Protein Info for MPMX19_04350 in Azospirillum sp. SherDot2

Annotation: hypothetical protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 392 transmembrane" amino acids 12 to 28 (17 residues), see Phobius details amino acids 48 to 65 (18 residues), see Phobius details amino acids 85 to 106 (22 residues), see Phobius details amino acids 131 to 159 (29 residues), see Phobius details amino acids 166 to 187 (22 residues), see Phobius details amino acids 200 to 218 (19 residues), see Phobius details amino acids 230 to 248 (19 residues), see Phobius details amino acids 281 to 298 (18 residues), see Phobius details amino acids 319 to 338 (20 residues), see Phobius details amino acids 344 to 364 (21 residues), see Phobius details PF10129: OpgC_C" amino acids 7 to 368 (362 residues), 299.3 bits, see alignment E=3.8e-93 PF01757: Acyl_transf_3" amino acids 9 to 364 (356 residues), 44.6 bits, see alignment E=1.1e-15

Best Hits

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (392 amino acids)

>MPMX19_04350 hypothetical protein (Azospirillum sp. SherDot2)
MQQRQTRDARLDLFKGVALLIIFINHVGGNPLAKVMPARFGPSDSAEIFVFISGYAIALA
YGPVLAERGFAACQRKALDRCRQLWVANILTMLVSALVVAFAVYIGDLPMEASNRLESFA
PLFDTPVTAMAWTLVLMYLPFAFDILALYILLVAVAPLFLWSYARFGYAAVALSVLLYLV
AQAAPGLVPPNLWDEDWNFSPLAWQCVFFLGTALALVVRSGRVRLPQSRWLLTAVLALLA
GMAVWKFAASDIGHAVTPAALRGWLPEETIPWADKDTLGPMRLLHFLALACAAALLVPRD
AGWLRSAPARLLVACGRHSLPVFCAGVVLSIAGSALLVAEDGALMVLAVNLVGVAALLAL
ALVLERRRTRRQPAKPAVPSAASTPSAVPETP