Protein Info for MPMX19_04304 in Azospirillum sp. SherDot2

Annotation: hypothetical protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 406 signal peptide" amino acids 1 to 33 (33 residues), see Phobius details TIGR03863: ABC transporter, substrate binding protein, PQQ-dependent alcohol dehydrogenase system" amino acids 56 to 399 (344 residues), 487.2 bits, see alignment E=1.3e-150 PF13458: Peripla_BP_6" amino acids 61 to 219 (159 residues), 52.6 bits, see alignment E=3e-18

Best Hits

KEGG orthology group: None (inferred from 92% identity to azl:AZL_a05220)

Predicted SEED Role

"FIG00445410: hypothetical protein"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (406 amino acids)

>MPMX19_04304 hypothetical protein (Azospirillum sp. SherDot2)
MTKLRLPRLLNSVSLAALGALLLAGAPGVGTAADAVGEIRIGFLSQTPEPPPSVANPDEP
AADDGLAGASLAIADNNTTGKFLKQSFVLDSVEVAPDGDAAAALRELAGRGDRFVVVDAP
GATVEALSKLPEARTLLLLNATAPDDALRGSACAANLVHVAPSRAMLADALGQYLVKKRW
PRWFLVTGRRPEDKLYADAVRRAAKRFGAQIVAEKEWTAESDVNRTAESEIPVFTQAKAY
DVLVVADEVGEFGDYLSYRTADPRPVAGTQGLVPTVWHRTHEQWGAAQLQSRFKAAAKRP
MTARDHNDWTAVRVVGEAAARARTADPDRLIAFIQSPDFTMSAFRGAPLSLRPWDGQLRQ
PVLLAADRSLVSVSPQEGFLHPRTELDSLGYDQPETLCKTRGKTTP