Protein Info for MPMX19_04213 in Azospirillum sp. SherDot2

Annotation: hypothetical protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 421 PF13432: TPR_16" amino acids 29 to 85 (57 residues), 21.4 bits, see alignment 2e-07 amino acids 63 to 125 (63 residues), 34.7 bits, see alignment E=1.5e-11 amino acids 96 to 158 (63 residues), 32.9 bits, see alignment E=5.2e-11 PF13181: TPR_8" amino acids 60 to 85 (26 residues), 14.9 bits, see alignment (E = 1.7e-05) amino acids 94 to 125 (32 residues), 23.7 bits, see alignment (E = 2.6e-08) amino acids 126 to 158 (33 residues), 16.2 bits, see alignment (E = 6.8e-06) PF07719: TPR_2" amino acids 94 to 125 (32 residues), 27.7 bits, see alignment (E = 1.3e-09) amino acids 126 to 158 (33 residues), 26.6 bits, see alignment (E = 3e-09) PF13176: TPR_7" amino acids 94 to 124 (31 residues), 17.8 bits, see alignment (E = 1.9e-06) PF13424: TPR_12" amino acids 94 to 157 (64 residues), 31.7 bits, see alignment E=1e-10 PF13414: TPR_11" amino acids 99 to 135 (37 residues), 26.9 bits, see alignment 2.2e-09 amino acids 133 to 172 (40 residues), 36.8 bits, see alignment 1.7e-12 PF00515: TPR_1" amino acids 126 to 158 (33 residues), 29.5 bits, see alignment (E = 3.2e-10) PF13489: Methyltransf_23" amino acids 241 to 365 (125 residues), 47.1 bits, see alignment E=1.6e-15 PF13847: Methyltransf_31" amino acids 259 to 355 (97 residues), 31.8 bits, see alignment E=8e-11 PF13649: Methyltransf_25" amino acids 261 to 350 (90 residues), 51.7 bits, see alignment E=8.5e-17 PF08242: Methyltransf_12" amino acids 262 to 352 (91 residues), 56.7 bits, see alignment E=2.3e-18 PF08241: Methyltransf_11" amino acids 262 to 354 (93 residues), 54.1 bits, see alignment E=1.4e-17

Best Hits

KEGG orthology group: None (inferred from 85% identity to azl:AZL_a06460)

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (421 amino acids)

>MPMX19_04213 hypothetical protein (Azospirillum sp. SherDot2)
MAGSRSSLRGGLRRGMAGIAVPPAVKLSRQADALAAAGDVAGADPLYAQALAADPTLAGT
HNNHGNALRALGRLDEAAAAYRAAVFHGLHEGMAHYNLGSVLRQAERQDEAEAAFRQALA
LRPDHAEAWNNCGNLLRDLGRFGGAAVDYRRALALRPDWADAHDNLGAVLYLLHEQGGEE
DAAALARLWRRDHPDNPLARHIGAAIAGEEADPRAPDDYVRQTFDLFADEFDRKLAELDY
RAPALLAGLLSDDVPAGDLDVLDAGCGTGLCAEALRPYARRLVGVDLSDGMLKRARARGL
YDGLHATELVGFLAAHRLTFDLVMAADVFCYFGVLDDALAAARAALRPGGRLAFTVEELD
PADERPHRVATHGRYAHAEAYVRTAVANAGLVLRRCDHDRLRFESGEPVMGLVVLAQRPA
V