Protein Info for MPMX19_04196 in Azospirillum sp. SherDot2

Annotation: hypothetical protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 431 PF00805: Pentapeptide" amino acids 34 to 69 (36 residues), 35.1 bits, see alignment 1.2e-12 amino acids 70 to 107 (38 residues), 34.6 bits, see alignment 1.7e-12 amino acids 141 to 170 (30 residues), 24.2 bits, see alignment (E = 3e-09) amino acids 151 to 190 (40 residues), 35 bits, see alignment 1.2e-12 amino acids 167 to 205 (39 residues), 49.8 bits, see alignment 2.9e-17 amino acids 191 to 227 (37 residues), 44.7 bits, see alignment 1.1e-15 amino acids 294 to 329 (36 residues), 23 bits, see alignment 6.9e-09 amino acids 311 to 348 (38 residues), 34.6 bits, see alignment 1.7e-12 amino acids 360 to 382 (23 residues), 25.1 bits, see alignment (E = 1.6e-09) amino acids 381 to 413 (33 residues), 30.7 bits, see alignment (E = 2.8e-11) PF13599: Pentapeptide_4" amino acids 144 to 205 (62 residues), 31.2 bits, see alignment E=3.3e-11

Best Hits

KEGG orthology group: None (inferred from 92% identity to azl:AZL_a06620)

Predicted SEED Role

"Pentapeptide repeat family protein"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (431 amino acids)

>MPMX19_04196 hypothetical protein (Azospirillum sp. SherDot2)
MVQNRTLRRLDQAQLDQAVRKHEMFRNARVGGARANLSFCDLSGLDLSGRDLAHADFVGA
SLRGADLSGARLDCASFFVADLRQTNFDGASLIKADLRGACLRGAILVGANLFEADLRDG
SLAEKDRSGHLHMVQIESSPADADGADLSGANLTNARMSGVMAVHTDFSDAVMRGCKLVR
ATMRGANFTGSNLEGADLSGADLRGACLRGAVLTGATMVMADLTDADVEEALTDKPVGRV
VAELGRSLEDLLADHMTWVGSSGAQGAMLDLSGFDLRHAPSLAHMCLTMLRAAGATLYGL
DLSGVQMQAAVLDRADMRGAKLTDGDLRGISLRNAKLNNADLRNVNLRPLVFDEQRSRPA
DLSGAKLRYADLSGACLRSVNLGNADLSFANLRGCDLARTDLTGAKLFGAKLERRALNEG
VILDGVAGLKT