Protein Info for MPMX19_04184 in Azospirillum sp. SherDot2

Annotation: hypothetical protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 492 transmembrane" amino acids 12 to 33 (22 residues), see Phobius details amino acids 45 to 71 (27 residues), see Phobius details amino acids 84 to 107 (24 residues), see Phobius details amino acids 122 to 143 (22 residues), see Phobius details amino acids 152 to 174 (23 residues), see Phobius details amino acids 180 to 212 (33 residues), see Phobius details amino acids 236 to 257 (22 residues), see Phobius details amino acids 263 to 282 (20 residues), see Phobius details amino acids 294 to 314 (21 residues), see Phobius details amino acids 317 to 322 (6 residues), see Phobius details amino acids 328 to 347 (20 residues), see Phobius details amino acids 360 to 380 (21 residues), see Phobius details amino acids 386 to 408 (23 residues), see Phobius details amino acids 420 to 443 (24 residues), see Phobius details amino acids 449 to 471 (23 residues), see Phobius details PF13440: Polysacc_synt_3" amino acids 34 to 327 (294 residues), 23.7 bits, see alignment E=1.4e-09

Best Hits

KEGG orthology group: None (inferred from 93% identity to azl:AZL_a06910)

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Compare to protein structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (492 amino acids)

>MPMX19_04184 hypothetical protein (Azospirillum sp. SherDot2)
MAVEAGTIIKHGWMFMVANVVNRAAGLLLLPLYAKVLSPAEFGVYALISVVGDIVAVMLM
IGMINAFTVVYFEHPDDRSRSRVVSTTMIGLWAASLALLAVALPAGWGASDLLFGGTDQG
PIIAFAFAGIAFSAVFELALAYYRVHKRSGTCLLISVGKAVGLIGLNLSFLLVMDLGVTG
IFLANAITFVGLGIALTVAILAANGVGFSFGILKRVTVLGLPFMPQTMLDMGNQFAMRYL
VNLLMGVAAVGVLSFGLRLATMLYMFLTASFLQIWSVSRIEAQDSTAGRDQSEFVFYLFV
VLLSAAALGMALTAPEVLWLIASAEYETVLPCMPLLVLAYVVHGVRMHAEVGLVKTKKVG
VLPAISLGGLAIGTLIMAVTLGPLGLMGGAIGVLGRELVMLVATEAMCRRLSPSEPPLSA
LRVTGILAPAAIAYLAGLALFGFEVNPTFAAAKVGLTMLFAVAALFGPSFGKADRAMLFR
MTARFRRRPQTA