Protein Info for MPMX19_04124 in Azospirillum sp. SherDot2

Annotation: hypothetical protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 493 signal peptide" amino acids 1 to 24 (24 residues), see Phobius details transmembrane" amino acids 39 to 62 (24 residues), see Phobius details amino acids 89 to 109 (21 residues), see Phobius details amino acids 115 to 135 (21 residues), see Phobius details PF00924: MS_channel_2nd" amino acids 133 to 201 (69 residues), 60.8 bits, see alignment E=1.2e-20 PF00027: cNMP_binding" amino acids 340 to 443 (104 residues), 55.8 bits, see alignment E=3.7e-19

Best Hits

KEGG orthology group: None (inferred from 80% identity to azl:AZL_a03080)

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (493 amino acids)

>MPMX19_04124 hypothetical protein (Azospirillum sp. SherDot2)
MTALRRLSAPALVLALLAALVAAKPWLHRHLEPLVGPDLSSGFDIAVASASWLVAAWGGA
RLIDLLAAGNGGIGPDGAPRPPRIPRLLADLMRFFVYGVAVVAILAFVFEQPVTGLLATS
GVAIAVLGFALRNMIADIFAGIALNIEHPYRIGDWLELSPGVSGRVDEINWRATRLIAGD
GTAIVVPNGIVAGSRFVNYSRPSPAFRTTVPILLDQEVPVERAKRILLSAMLCADGVLTT
PRPDVVVEAVTPNGISYLARYWLDDFGRVALVRDSVLAAVVGNLARAGIEPARPKQEIRR
RQPALPDTDTLRRGLLRQTELFDAFDDDEVDALALAMRQIHVPAGSPAVRQGDAGESLFV
IAEGVFDVQVAAPAPAFAAPAFATDAMDGQRPGMLHLTRLRPGDLFGEMSLLTGQPRSAS
VVACTDSVVFELARSHLDPVLRRRPELAERLAELMAERQSRNAAETNRQQGAAPPPPVES
QALLTRLRGFFGL