Protein Info for MPMX19_04097 in Azospirillum sp. SherDot2

Annotation: IS5 family transposase ISAzs10

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 358 PF05598: DUF772" amino acids 53 to 126 (74 residues), 81.5 bits, see alignment E=5.5e-27 PF01609: DDE_Tnp_1" amino acids 204 to 348 (145 residues), 49.6 bits, see alignment E=6.4e-17 PF13751: DDE_Tnp_1_6" amino acids 300 to 351 (52 residues), 27.3 bits, see alignment 5.8e-10

Best Hits

KEGG orthology group: None (inferred from 97% identity to azl:AZL_019040)

Predicted SEED Role

"Mobile element protein"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (358 amino acids)

>MPMX19_04097 IS5 family transposase ISAzs10 (Azospirillum sp. SherDot2)
MRGSDDHSEGLFSYVSCEARVPASHPLRPIRAIVDEALEVMSPAFEGLYSKIGRPSIPPE
KLLRALLLQAFYSVRSERQLMEQLDYNLLFRWFVGLSMDVPVWDVTVFTKNRERLLAGDV
ATKFLATVLGQPKVKALLSDEHFSVDGTLIEAWASVKSFRPKDGSGEPPGPGRNGDRDFH
GEKRSNETHASTSDPEARLYRKGNGQPAKLAFMGHALMENRNALVVDVRLTAATGLAERE
AAVSMVEAIPGRHRITVGADKAYDTKDFVANMRELGAAAHVAQNTSNRRSAIDGRTTRHP
GYAVSLRIRKRIEELFGWIKGAGLRKTRHRGTARVGWMFTLTATAYNLIRLPKLLAAA