Protein Info for MPMX19_04064 in Azospirillum sp. SherDot2

Annotation: hypothetical protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 550 600 transmembrane" amino acids 54 to 74 (21 residues), see Phobius details amino acids 98 to 121 (24 residues), see Phobius details amino acids 132 to 153 (22 residues), see Phobius details amino acids 180 to 202 (23 residues), see Phobius details amino acids 226 to 249 (24 residues), see Phobius details amino acids 285 to 306 (22 residues), see Phobius details amino acids 335 to 362 (28 residues), see Phobius details amino acids 390 to 413 (24 residues), see Phobius details amino acids 426 to 450 (25 residues), see Phobius details amino acids 456 to 475 (20 residues), see Phobius details amino acids 509 to 533 (25 residues), see Phobius details amino acids 564 to 584 (21 residues), see Phobius details PF00528: BPD_transp_1" amino acids 113 to 310 (198 residues), 54.8 bits, see alignment E=5.1e-19 amino acids 407 to 592 (186 residues), 52.1 bits, see alignment E=3.4e-18

Best Hits

KEGG orthology group: K02011, iron(III) transport system permease protein (inferred from 93% identity to azl:AZL_a07870)

Predicted SEED Role

"Ferric iron ABC transporter, permease protein" in subsystem Campylobacter Iron Metabolism or Iron acquisition in Vibrio or Transport of Iron

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (600 amino acids)

>MPMX19_04064 hypothetical protein (Azospirillum sp. SherDot2)
MRNIPLPPREREGAHAQHGKGEGERKKPCASDSLDHPSPSPRLWRGSPPSPGAGEGFFLL
VGLLVLLPVLRLLWEAGDATVLGRALNSPMTWRATTNSIAIAAGATLAAALIGGPFALLI
GLTNLRARTAMSFALILPLMIPPQIVAMAWTHLAGSGSPILKPLGLAPPVGTANPVQSSA
GMMLVMGIEHAPLVFLALRAALRAIPGDVLEAARASGAGPWRAVRGVVLPLCLPGLVAGL
AMAFVAALGNFGVPALLGVPAGIPMLPTLIYRRLAGFGPSALPEVAVLAALIGLVACLGI
ALQTILQARIASRLPGGARPLADLPLGAARAPVEWLAWGVLALLVAAPLTALLATSLVSV
YGLPIGLDTLTLAHYREVLALDQVGRAFANSLLLSGSAAALLALLAVPLAHAMALSGGGG
RIARAVGVLVELPHAVPGVVLGIGCILLFLKPLPGLGVSLYGTLWIILAAYLVRFLPLAL
RPVQAACAALDPTVEEAARALGAGPLRRLVTVVAPLVAPAAAAGGLLVFLTAFNELTVSI
LLWSQGRETLGVVVYALEEGGSPTLGAALGVIAILVVLAAMLAAGRFGRRLPPGVVPWRS