Protein Info for MPMX19_04028 in Azospirillum sp. SherDot2

Annotation: Gamma-glutamylputrescine oxidoreductase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

• PF01494: FAD_binding_3
  • amino acids 30 to 61 (32 residues), 23.8 bits, see alignment (E = 3.9e-09)
• PF01266: DAO
  • amino acids 31 to 382 (352 residues), 204.9 bits, E=3.9e-64

Best Hits

KEGG orthology group: None (inferred from 86% identity to azl:AZL_a08100)

MetaCyc: 41% identical to pipecolate oxidase (Pseudomonas putida)
L-pipecolate oxidase. [EC: 1.5.3.7]

Predicted SEED Role

"L-pipecolate oxidase (1.5.3.7)" in subsystem Lysine degradation

MetaCyc Pathways

• L-lysine degradation II (L-pipecolate pathway) (2/9 steps found)
• L-lysine degradation V (2/9 steps found)
• superpathway of L-lysine degradation (13/43 steps found)

KEGG Metabolic Maps

• Lysine degradation

Isozymes

No predicted isozymes

Use Curated BLAST to search for 1.5.3.7

Protein Sequence (431 amino acids)

>MPMX19_04028 Gamma-glutamylputrescine oxidoreductase (Azospirillum sp. SherDot2)
MLNDPRSHGLWERTAPAAPPTAPLSGSVRADVVIVGAGYTGLSTALHLAESGISAVVVEA
VEIGFGGAGRNVGLVNAGMWVMPDQLVSTLGPVYGERLIELLGNAPRAVFDLITKHGIAC
EDERSGTLHCSVGPAGLRELEQRADIWQKRGAPVRLLDAKETAEKVGTTAYTGSLLDLRA
GTIQPLAYARGLAAAAIAAGARIFTGSPVQSASQTRAGWEVKTPDGSVTADWVVVATDAY
SIGPWVQLRTEQVHLPYFNLATEPLSDAMQKAILPERQGVWDTKSVLSSYRFDRQGRLVF
GSVGALRGTGTAIHRAWAQRSLAALFPQLGPVRFESEWYGQIGMTKDNLPRFHRLDRNVI
GFSGYNGRGIAPGTVLGRCLAEHIAGKLPEAEMPLPSTAPDTLSARAVQEAVYEYGAQAT
HLVGARLPGKI