Protein Info for MPMX19_03980 in Azospirillum sp. SherDot2

Annotation: Sensor protein FixL

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 550 600 signal peptide" amino acids 1 to 28 (28 residues), see Phobius details TIGR00229: PAS domain S-box protein" amino acids 59 to 182 (124 residues), 44.9 bits, see alignment E=5.8e-16 amino acids 183 to 303 (121 residues), 47.6 bits, see alignment E=8.8e-17 PF13426: PAS_9" amino acids 83 to 174 (92 residues), 21.8 bits, see alignment E=4.9e-08 amino acids 202 to 296 (95 residues), 38.9 bits, see alignment E=2.3e-13 PF08447: PAS_3" amino acids 84 to 169 (86 residues), 67 bits, see alignment E=3.7e-22 amino acids 210 to 280 (71 residues), 27.5 bits, see alignment E=7.8e-10 PF00989: PAS" amino acids 188 to 279 (92 residues), 41.6 bits, see alignment E=2.8e-14 PF08448: PAS_4" amino acids 194 to 298 (105 residues), 31.8 bits, see alignment E=3.7e-11 PF02518: HATPase_c" amino acids 463 to 585 (123 residues), 84.3 bits, see alignment E=2.1e-27

Best Hits

KEGG orthology group: None (inferred from 91% identity to azl:AZL_a02780)

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (600 amino acids)

>MPMX19_03980 Sensor protein FixL (Azospirillum sp. SherDot2)
MAAEPVMMALAAGAVGGLLGVLLGRYAGRRAARHPSSPHPANPAGARLAHALHEPDIGER
LEMALEATGAAVWDADLVAGTCWWSDTFPRMLGYRTRPAMPPDFWERRLHAEDRERVLAH
IASHLAGETSAYAYSYRLRHEGGGWVWIAAKGRAFRDDTGRAVRYAGIMTDITEARRQEE
RLRASEERLLKIMEAAPIAVNVTTRDGRWLFCNAQSVRLMGRDRSELMRTPVADLYAEPA
DRAALIARFDREGAFRNAEIRFRRPDGSVVWVLSSWNSIELDGEAALLTWLYDITDRKAA
ESAMIQAREEAEQALADLREAQESLIQAETMASLGQLVAGVAHEINTPIGIGLTAASHIG
EQAQVLRDRFTGNALRRSEFLEFLDGLSESSRLLMANIDRAASLVQSFKQVAVDQSSGDR
RVFELGGYIQELLFSLRPRLKRTNLRVAVECDDELTMDSFPGALGQVLTNLVINAVVHAY
GDGDRGGDRGGDRLVERPAGTIRITAQADGAERVRIDFIDDGAGIAPEHLSKVFDPFFTT
KRGQGGSGLGLHIVFNTVTGPLGGSVSVQSWPGQGTRFTIQLPREAPAMEPAVAAEPALG