Protein Info for MPMX19_03942 in Azospirillum sp. SherDot2

Annotation: hypothetical protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 550 600 650 700 750 800 850 897 PF20464: MmeI_N" amino acids 21 to 245 (225 residues), 90.5 bits, see alignment E=3.6e-29 PF20465: MmeI_hel" amino acids 250 to 322 (73 residues), 45.1 bits, see alignment E=2.8e-15 PF20473: MmeI_Mtase" amino acids 413 to 703 (291 residues), 113.6 bits, see alignment E=1.8e-36

Best Hits

Predicted SEED Role

"FIG00990916: hypothetical protein"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (897 amino acids)

>MPMX19_03942 hypothetical protein (Azospirillum sp. SherDot2)
MSVLSSKSCDEHVEQDPSRSPKAFIRYWSDKGGSERANYQKFINQLCALIGTAEPDASSE
RDALNNYVYEKRVRALDLEGDDGRNNYLDCYKRDCFVLEAKQSRKRQRGGQEGSDLFGGL
SHSSPPAGTRPSWDRLMRQARAQAERYAKALPTDHGWPPFLIVVDVGHVIETYADFTGLG
KAYMPFPDSRSHRIRLAELADPEIRARLKAIWEMPKSLDPSARRAEVTRDIAQRLARLAQ
SLEKRYEPKAVALFLMRCLFTAFAQNVGLLPDGAFTGVLSDARPNPQFLPRYLGPFWRSM
DRGSDHDTTIRARVRHFNGGLFREAEALALDEQEIGELIAACSRDWKNVEPAIFGTLLEN
ALSKRERSQYGAFFTPRAYVERLVVAAVIEPLMAKWRNAQVIAENARQKNDQAQAIRQIK
EFHQDLCSVKILDPACGSGNFLYVALEKMKALEGEVIATLEEIGGGTQANLDLAGHTVGP
HQLLGLEKNPRAVPIAELVIWIGHLQCHLRQRGPESLSEPILHSYDNIRQCDAVLSWERV
EPMLDEAGQPRVKWDGVSWKTDPFTGQEVPDESRTVPLQRYVGARPADWPQADYIVGNPP
FIAGKDLRAELGDGYAEALWKAYPHMPGGADFVTYWWDKAADLVRKGTARRFGFITTNSI
TQTFSRRVIQRHLDAKTPLHLTFAIPDHPWADGQGAAAVRVAMTVGAPVEHGERTGLLKT
VVREGQATDRDGAVPVVLAVRHGRIHANLTTGADVAAAKALKANDGLSSPGVKLHGSGFL
VTQAQARALGLGRIAGLEERIREYRNGRDLTGRSRGLMVIDLFGMTEAEVRKKYPDVYQW
LLDRVKPERDINNRKSYRDNWWIFGEPRNEMRSATSGLNRYFATVETSRHRIFQMLS