Protein Info for MPMX19_03920 in Azospirillum sp. SherDot2

Annotation: Efflux pump membrane transporter BepE

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 100 200 300 400 500 600 700 800 900 1000 1074 signal peptide" amino acids 1 to 34 (34 residues), see Phobius details transmembrane" amino acids 35 to 36 (2 residues), see Phobius details amino acids 352 to 372 (21 residues), see Phobius details amino acids 378 to 398 (21 residues), see Phobius details amino acids 404 to 424 (21 residues), see Phobius details amino acids 451 to 474 (24 residues), see Phobius details amino acids 484 to 505 (22 residues), see Phobius details amino acids 551 to 570 (20 residues), see Phobius details amino acids 915 to 934 (20 residues), see Phobius details amino acids 941 to 961 (21 residues), see Phobius details amino acids 968 to 991 (24 residues), see Phobius details amino acids 1012 to 1032 (21 residues), see Phobius details amino acids 1039 to 1065 (27 residues), see Phobius details PF00873: ACR_tran" amino acids 11 to 855 (845 residues), 346.4 bits, see alignment E=3.1e-107 amino acids 903 to 1065 (163 residues), 115.8 bits, see alignment E=1.5e-37

Best Hits

KEGG orthology group: None (inferred from 69% identity to rpe:RPE_4651)

Predicted SEED Role

"Cobalt-zinc-cadmium resistance protein CzcA" in subsystem Cobalt-zinc-cadmium resistance

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (1074 amino acids)

>MPMX19_03920 Efflux pump membrane transporter BepE (Azospirillum sp. SherDot2)
MRLGLSGVLTRTFIRSPLTPLLLLASLVVGTVALLSLPREEEPQISVPMVDILVRADGLK
ADDAVELVTKPLEEIVKGIDGVEHTYSQTLDDRVVVTARFLVGTSADDAILRVHEKVRAN
LNRIPLGIPEPLIVGRGINDVAILTLTLAPRPDAASRWTDTALYGVADELLAQLVQVEDV
GRSVIVGGRPDQIRVEPDPERLALFGVTLNQLVDKVRSANRSFMVGSVRAEGGSLPALAG
QTLQGTADIGLLLVTARDGRPVYVKDVADIVMGARPDESTAWNLLPDGKGGLAGTPAVTI
AIAKRAGANAVTIAGRVLERVQAIQAGSLPRDLTLTVTRNYGETADEKVNELLFHLALAT
VTIVALIVLAIGWREGMVTLIVIPTTILLTMFASWLMGYTINRVSLFALIFSIGILVDDA
IVVVENIDRHWSMRDGRSKVQAAIEAVAEVGNPTVVATLTVIAALLPMMFVSGLMGPYMS
PIPANASAAMVFSFFAAMVLTPWLMVKLRPGEAPAGHGNEQGNGHGDGRGGLLGRLYLSV
ARPVIRSRRRAWTFLLVVGMATLASTALFYTKDVAVKLLPFDNKSELQVVVDLPRGAAQE
DTGRVLLAAARKIADLPELASVQAYGGTASPFNFNGLVRHYYLRDQPEQGDLQVNLAPKG
ERRRSSHDIALDIRARLRDLAVPDGTSLKVVEVPPGPPVLSTLLVEVYGPDAETRRKATG
IVRDAFRSVDFIVDVDDTVRPPGERLRFALDRESLEFHGVEEQAVYDTLQALVGGVPVGY
SHRGAGRTPIEISVRLPKSGLFLSERILATPVPGARGTVELGDLVTMTREPASYPLFRRN
GRFAEMVMADLAGRYEAPIYGMLAVQERLSRIDWKAAGLTAAPDILLHGQPDDQSRPALL
WEGEWEITYVTFRDMGAAFAVAILGIYLLVVAQFGSFKLPLVILVPVPLTLIGIVLGHWL
FGAAFTATSMIGFIALAGIIVRNSILLVDFIRHLRDRGLSVREAVLEAGAIRFKPILLTA
VAAMIGAAFILTDPIFQGLAISLLFGLLSSTLLTVLVIPAIYVVLRDDAPGRRE