Protein Info for MPMX19_03881 in Azospirillum sp. SherDot2

Annotation: hypothetical protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 440 PF08421: Methyltransf_13" amino acids 9 to 76 (68 residues), 53.2 bits, see alignment E=5.7e-18 PF13489: Methyltransf_23" amino acids 105 to 243 (139 residues), 54.7 bits, see alignment E=2e-18 PF08241: Methyltransf_11" amino acids 112 to 201 (90 residues), 22.7 bits, see alignment E=2.6e-08 PF08484: Methyltransf_14" amino acids 251 to 412 (162 residues), 159.9 bits, see alignment E=9.8e-51

Best Hits

KEGG orthology group: None (inferred from 53% identity to cyj:Cyan7822_5350)

Predicted SEED Role

"NDP-hexose 3-C-methyltransferase TylCIII"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (440 amino acids)

>MPMX19_03881 hypothetical protein (Azospirillum sp. SherDot2)
MLLRPRQTCRVCGSPILRPVIDLGPQMLQGAFAKPGRPAPAEVTLPMRLVRCGGDGDPAS
CGLLQTSASVLPDLLYRTYWYRSGLNATMRDHLRGIAGQAAALAGRPAPAVLDIGCNDGT
LLLSYPAASLRVGVDPSDIAAGLAGDVTVVNAFFPSDAALGELTGSRFDIVTSIAMFYDI
EDPCGAASAISGLLAPDGLWVLELSYLPLMLLRNAFDTVCHEHLEYYSLAVLETVASRAG
LRIFRAEVNGMNGGSIRCFACHAVNGRFGTAEDRAFLEALRRREAAMGLATDRPYRAFQR
RAEALRDELVGHLRAVRDRGGRVHVYGASTKGNVLLQWCGIGRDLVECAADRNPAKVGAV
TPGTNIPIVSEAESRALRPDLYLVLPWHFRREFLERERAMVMGGTRLLFPLPEVEVVDAG
NFEQALARLDDVEALLLGNG