Protein Info for MPMX19_03855 in Azospirillum sp. SherDot2

Annotation: Nickel and cobalt resistance protein CnrA

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 100 200 300 400 500 600 700 800 900 1030 signal peptide" amino acids 1 to 31 (31 residues), see Phobius details transmembrane" amino acids 336 to 354 (19 residues), see Phobius details amino acids 360 to 379 (20 residues), see Phobius details amino acids 390 to 412 (23 residues), see Phobius details amino acids 428 to 452 (25 residues), see Phobius details amino acids 464 to 486 (23 residues), see Phobius details amino acids 522 to 544 (23 residues), see Phobius details amino acids 858 to 876 (19 residues), see Phobius details amino acids 883 to 903 (21 residues), see Phobius details amino acids 909 to 929 (21 residues), see Phobius details amino acids 960 to 979 (20 residues), see Phobius details amino acids 985 to 1008 (24 residues), see Phobius details PF00873: ACR_tran" amino acids 6 to 1007 (1002 residues), 447.1 bits, see alignment E=6.3e-138

Best Hits

KEGG orthology group: None (inferred from 84% identity to bid:Bind_2561)

Predicted SEED Role

"RND efflux transporter"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (1030 amino acids)

>MPMX19_03855 Nickel and cobalt resistance protein CnrA (Azospirillum sp. SherDot2)
MSLNLSAIAVRERAVTLFFILLLAAAGAFAFVMLGRAEDPSFTIKTLTVTSVWPGATARE
MQDLVAEPLEKRLQELSWYDRVETTTRPGYAYMTLTLKDSTPPARVQEEFYQARKKMGDE
TRNLPPGVLGPFVNDEYSDVSFALYALKAKGLPMRELARQAEAIRQDLLHVPGVKKVNIL
GERPERIFVEFSYARLATLGVSAQDIVAALQRQNSVTPSGSIDTQGPQVFIRIDGAYDGV
QAIADTPIAAAGRTLKLSDIAEVRRGYEDPPTYIIRHQGEPTVMLATVMQEGWDGLALGR
ALEDRAAGIARSLPLGMTLDKVTDQAVNITAAVDEFMIKFAMALGVVLLVSLLSLGWRVG
IVVAAAVPLTLAVVFLIMLETGRFFDRITLGALILSLGLLVDDAIIAIEVMVVKMEEGVD
RIRAAAYAWSHTAAPMLSGTLVTIAGFLPVGFARSTAGEYAGNIFWVVGFSLIVSWIVAV
IFTPYLGVKMLPAIKPVPGGHEAIYGTPNYRRLRGIISFAVRHRIVTCGVVGLAFAAAIV
GMGGVKQQFFPTSDRPEVLVEVRLPEGTSIEMTTASVEKIERWLADQPEAKIVTSYVGQG
APRFFIALSPELPDPAFAKIVVLTPDAEAREALKHRLRQSVAQGLVPEAYVRVTQLVFGP
YTPFPVEFRVMGPDPAKLYDISEKALAVMRSVPDVRQANRDWGNRTPVLRFTPDQDRLNL
IGLSPAEVGQQLQFLLTGIAVTQVREDIRNVPIVARSAGGERLDPARLADFSLTSRTGQQ
IPLDQIGHADIRQEEPMMKRRDRTSVITIRSDYNEATQPPEVSKQIMTALQPLIASLPAG
YRIDMGGSIEESVKANTALGKVFPVMIAAMLVFIMLQVRSFSMMAMVLLTAPLGVVGVVP
MLLAFNQPFGFNAILGLIGLAGILMRNTLILTEQIKENQAAGLDDYHAVIEATVQRTRPV
ILTALAAVLAFIPLTHSVFWGSMAYTLIGGTAVGTVLILLFLPALYAAWFRIKPAAAEEA
SGPHARLGVI