Protein Info for MPMX19_03825 in Azospirillum sp. SherDot2

Annotation: IS5 family transposase IS4811

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 314 PF12852: Cupin_6" amino acids 2 to 177 (176 residues), 132 bits, see alignment E=3.2e-42 PF12833: HTH_18" amino acids 218 to 296 (79 residues), 72.7 bits, see alignment E=3.7e-24

Best Hits

KEGG orthology group: None (inferred from 71% identity to cse:Cseg_1812)

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (314 amino acids)

>MPMX19_03825 IS5 family transposase IS4811 (Azospirillum sp. SherDot2)
MDPLSDIIALLKPTAAVSKPITGRGRWGIGYPALRKPGFTLILKGECWVSFEGGAPLRIA
KGDFLLLPSTPAFTLSSHPGIACAPREPTDRPVRHGDQEGEAEFESLGGGFQIEQVNAPL
LLTLLPRMIHVPACEGRTDRFGRLIDLIAEECGQQDPGRELILQRMLEVLLVEALRWRGL
AADAVQSGLLSGLRDPALARVLRALHGDVRANWTVTGLAKIAGQSRSAFAARFGDVLGCG
PIEYLARWRMALAKDALVRGAKSLDRIAEEVGYESASAFSTAFRKRQGCPPGQFARNSAT
GGTGQPLSDDAGNP