Protein Info for MPMX19_03750 in Azospirillum sp. SherDot2

Annotation: hypothetical protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 550 586 transmembrane" amino acids 21 to 43 (23 residues), see Phobius details amino acids 69 to 89 (21 residues), see Phobius details amino acids 99 to 126 (28 residues), see Phobius details amino acids 130 to 154 (25 residues), see Phobius details amino acids 202 to 220 (19 residues), see Phobius details amino acids 240 to 260 (21 residues), see Phobius details amino acids 344 to 365 (22 residues), see Phobius details amino acids 385 to 408 (24 residues), see Phobius details amino acids 420 to 442 (23 residues), see Phobius details amino acids 452 to 474 (23 residues), see Phobius details amino acids 495 to 516 (22 residues), see Phobius details amino acids 553 to 572 (20 residues), see Phobius details PF00528: BPD_transp_1" amino acids 88 to 253 (166 residues), 52.8 bits, see alignment E=2.2e-18 amino acids 400 to 569 (170 residues), 50.7 bits, see alignment E=9.1e-18

Best Hits

KEGG orthology group: K02050, sulfonate/nitrate/taurine transport system permease protein (inferred from 94% identity to azl:AZL_c01410)

Predicted SEED Role

"ABC-type anion transport system, duplicated permease component"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (586 amino acids)

>MPMX19_03750 hypothetical protein (Azospirillum sp. SherDot2)
MVWINTNVSVKATDAAPNRWDVVALPLVIGLLALLAIGGHQMALPLNSVEEVPVTLDPWM
LPEYALRSTLRMLAAMAASLLFTFTYATLAAKSRRAGMLLIPVLDVLQSVPVLGYISFTV
VFFLGLFPGSVLGAECAAIFAIFTSQAWNMAFSFYQSLRTVPRDLDEAATGFGFSGWQRF
WTLEAPYAAPGLVWNMMMSMSGGWFFVVASEAITVGDHTITLPGIGSYLAKAIDGQRLDA
VGWAVLAMLLVILAYDQLLFRPLVAWADKFRVELTGAQEVPESWLLTLFQRTRFFRAVFA
PFERMLGRLVWLRLPVGGASRGAAGGRRAGGRLLDRVPARAVDIVWYLLLAVAGLWAGWS
MIAFVSSGVDWGDVGTVLLLGGATLLRVIVLIAVATLVWVPLGVLIGLRPRLAEKVQPAA
QFLAAFPANLLFPVAVVAIVRFDLNPDVWLSPLMILGTQWYILFNVIAGATAFPGDLKEA
AANFRIRGWQWWRDVMLPGVFPYYVTGAVTASGGSWNASIVAEAVNWGDTRLTAHGLGSY
IAQATEAGDYPRIVLGIAVMSLFVILFNRLLWRPLYAFAERRLRLA