Protein Info for MPMX19_03688 in Azospirillum sp. SherDot2

Annotation: Response regulator UvrY

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 210 PF00072: Response_reg" amino acids 5 to 116 (112 residues), 97.6 bits, see alignment E=1e-31 PF08281: Sigma70_r4_2" amino acids 146 to 184 (39 residues), 27.7 bits, see alignment 3.5e-10 PF04545: Sigma70_r4" amino acids 146 to 180 (35 residues), 29.1 bits, see alignment 1.2e-10 PF00196: GerE" amino acids 148 to 203 (56 residues), 51.9 bits, see alignment E=9.1e-18

Best Hits

Swiss-Prot: 37% identical to MOXX_PARDE: Methanol utilization control regulatory protein MoxX (moxX) from Paracoccus denitrificans

KEGG orthology group: None (inferred from 89% identity to azl:AZL_b04540)

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (210 amino acids)

>MPMX19_03688 Response regulator UvrY (Azospirillum sp. SherDot2)
MTHTILLVDDHPIVRAGCQRLLAEAALGRVVEAEDVGSALDLWRAEHPDVVVLDLNIPGD
GGGMAVLRTIREENPAVPVLIFSMHEDPAIAARALKAGARGYVTKNDAPDSLASAIGTVL
AGRIHLDSGLARDLALMSLSPPSDPLAVLTQREREILTLVGRGMTAAAIAERLGISQKTV
ANSCTQIKDKLGADSARALIRIAIDNGLAD