Protein Info for MPMX19_03685 in Azospirillum sp. SherDot2

Annotation: hypothetical protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 226 signal peptide" amino acids 1 to 36 (36 residues), see Phobius details PF00805: Pentapeptide" amino acids 85 to 118 (34 residues), 40.1 bits, see alignment 3.1e-14 amino acids 119 to 158 (40 residues), 41.6 bits, see alignment 1.1e-14 amino acids 139 to 175 (37 residues), 30.9 bits, see alignment 2.3e-11 amino acids 159 to 198 (40 residues), 27.7 bits, see alignment 2.3e-10 amino acids 194 to 219 (26 residues), 20.4 bits, see alignment (E = 4.5e-08)

Best Hits

KEGG orthology group: None (inferred from 92% identity to azl:AZL_b04570)

Predicted SEED Role

"pentapeptide repeat family protein"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (226 amino acids)

>MPMX19_03685 hypothetical protein (Azospirillum sp. SherDot2)
MTSHSKAALPRKLCRILALNALAVCLAAPVPAVLAAEMETAAIPAAVEEAALPVGGGEEE
RASVVNGCTLGPRIVCPNLDLRHRNLRGLSLAGADLHGANLMRADLRKADLRGADLTGAI
LDGADLRTAFLQGARLSGARLRGANLEFARATGADFTGSDLTAANLEAIRADKINLAGAS
LEGANLQEAKMALSNLSGANMDGAKLRFAIFQDALMTGCRSCPTGW