Protein Info for MPMX19_03626 in Azospirillum sp. SherDot2

Annotation: hypothetical protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 374 PF01408: GFO_IDH_MocA" amino acids 7 to 125 (119 residues), 72.4 bits, see alignment E=5.4e-24 PF02894: GFO_IDH_MocA_C" amino acids 139 to 372 (234 residues), 71.4 bits, see alignment E=9.6e-24

Best Hits

Swiss-Prot: 44% identical to Y4HM_SINFN: Uncharacterized oxidoreductase y4hM (NGR_a03370) from Sinorhizobium fredii (strain NBRC 101917 / NGR234)

KEGG orthology group: None (inferred from 66% identity to mes:Meso_0450)

Predicted SEED Role

"Oxidoreductase, Gfo/Idh/MocA family"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (374 amino acids)

>MPMX19_03626 hypothetical protein (Azospirillum sp. SherDot2)
MVGGGQGAFIGAVHRIAARIDDRYELVAGALSSSPERARASGTELFLAPDRCYDDFHRMA
AAEAARPDGIDAVAIVTPNHLHYPAAKAFLEAGIHVICDKPLVHTVAEAEELAALVRSRN
LVFVLTHNYSGYPMIRQARAMVASGLLGRIRVVQAEYAQDWLATDLEASGNKQASWRTDP
AQSGIAGCIGDIGTHAFHLAEFVTGLNCTHLAADLSAFVPGRRLDDNAHIMMRFDGGARG
MLWASQVSPGTTNGLRLRIFGEAGGLEWQQEQPNELRFTPLGEPTRTLLRAGAGSLPAAS
GISRTPAGHPEGYLEGFAQIYRDAADRIAASIDGRPAPADVPLPTVEDGVRGVRFIHGAV
ESSRRDAAWVSLAG