Protein Info for MPMX19_03563 in Azospirillum sp. SherDot2

Annotation: Propane 2-monooxygenase, reductase component

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 352 PF00111: Fer2" amino acids 16 to 91 (76 residues), 53.3 bits, see alignment E=3.2e-18 PF00970: FAD_binding_6" amino acids 118 to 209 (92 residues), 50.4 bits, see alignment E=3.7e-17 PF00175: NAD_binding_1" amino acids 221 to 328 (108 residues), 70.6 bits, see alignment E=2.5e-23

Best Hits

Swiss-Prot: 38% identical to DMPP_PSEUF: Phenol hydroxylase P5 protein (dmpP) from Pseudomonas sp. (strain CF600)

KEGG orthology group: K00523, CDP-4-dehydro-6-deoxyglucose reductase [EC: 1.17.1.1] (inferred from 96% identity to azl:AZL_c02880)

MetaCyc: 38% identical to phenol hydroxylase reductase component (Pseudomonas sp. CF600)
RXN-17503 [EC: 1.14.13.244]

Predicted SEED Role

"Methane monooxygenase component C (EC 1.14.13.25)" (EC 1.14.13.25)

MetaCyc Pathways

KEGG Metabolic Maps

Isozymes

Compare fitness of predicted isozymes for: 1.14.13.25, 1.17.1.1

Use Curated BLAST to search for 1.14.13.244 or 1.14.13.25 or 1.17.1.1

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (352 amino acids)

>MPMX19_03563 Propane 2-monooxygenase, reductase component (Azospirillum sp. SherDot2)
MTAQALQNSPAVHTVRLEPVGIEMEVAEGETILDAAFRQGVSLMHGCKEGQCSACKCLLI
DGDVEMLKYSTFALSDPERDSNHILLCRSLAYSDVAVELLNYDEDLLSRSIPVKDFNARL
AAVEPLTHDIVAIALDLDQPMKFWAGQYVDITLPGIGLTRSFSMGNPPADGSRLEFIIKK
YPDGAFSRQLDGGLSVGDRVSVRGPYGSCFRREGREGPMILVGGGSGMAPLLSILRDQAA
SGETRPVRLFYGARSRKDLFHLDQFEEFARSLPDFAFIPALSHAEEGDGWTGETGFIHEV
LRRHLSGMDEVEEADVFSCGPPPMIDAVLPVLQMAGVDSARVYFDKFTPATR