Protein Info for MPMX19_03495 in Azospirillum sp. SherDot2

Annotation: Adaptive-response sensory-kinase SasA

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 550 600 650 704 transmembrane" amino acids 26 to 49 (24 residues), see Phobius details amino acids 341 to 365 (25 residues), see Phobius details PF14827: dCache_3" amino acids 63 to 330 (268 residues), 42.2 bits, see alignment E=2.8e-14 PF17201: Cache_3-Cache_2" amino acids 222 to 345 (124 residues), 58.3 bits, see alignment E=3e-19 PF17202: sCache_3_3" amino acids 228 to 340 (113 residues), 99.3 bits, see alignment E=5.5e-32 PF00672: HAMP" amino acids 365 to 416 (52 residues), 41.7 bits, see alignment 4.2e-14 PF00512: HisKA" amino acids 464 to 526 (63 residues), 48.4 bits, see alignment E=2.7e-16 PF02518: HATPase_c" amino acids 576 to 682 (107 residues), 80.9 bits, see alignment E=3.4e-26

Best Hits

KEGG orthology group: None (inferred from 56% identity to tmz:Tmz1t_3720)

Predicted SEED Role

"Signal transduction histidine kinase"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (704 amino acids)

>MPMX19_03495 Adaptive-response sensory-kinase SasA (Azospirillum sp. SherDot2)
MGRLSRLRAALDERLTPFTGSVRHKLLALVLAPLLLGMPALLLIVWYWGTQGYNQLLINK
VSADLGTARQVFDRVQGTVGDGLAALAASHRLALALERREGGRLEALLDETAHRQGLDFL
LLLDPQGRVRAGGGAEKAGSEGADRSGWTVVRSALRGDGTHGLDVLEPEHLAAIDPSLPA
RTLIPLVPTRNAASTARSVEDRALTIHAAVPIFGLDGEILGVLEGGTLLNGSQTIVDRIN
TVVYQEASLPLGSQGTATLFLDDTRIATNVRLFEGERALGTRASAAVYRRVMGEGRVWLG
SAFVVDDTYVSGYEPLLDTEGRRIGMLYVGFLEAPLQDALYRAMTGLVLAFLAVSALGTL
ADLRFAQAIFRPLERMNRVIATIEAGDETARAGPSRSRDELGRLSRAFDQLLDSLAARRL
ELQRSAEDLDRKVAERTAELESANATLRQASRQLVLSEKLAAIGQLTAGVAHEINNPVAV
IQGNLDLLGEVLGDAAAPVKDEIRLIDEQTRRIQTIIAKLLQFARPGDYAGQAEPVDVNA
VVLDCLLLTRHTMGRRRIAVETSLTATVPVEISRGELQQVLVNLMVNAVQAMPDGGTLTI
ETADTRFPENGEAGVVLSVHDTGHGIQPDCLGRVFDPFFTTKKSEGTGLGLSISFAIVQR
QGGHIAVQSRPGLRTTFTVTLRRIARFAGRPGEAASPSVLFRDE