Protein Info for MPMX19_03436 in Azospirillum sp. SherDot2

Annotation: hypothetical protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 100 200 300 400 500 600 700 800 900 1000 1100 1200 1300 1416 transmembrane" amino acids 16 to 38 (23 residues), see Phobius details amino acids 377 to 397 (21 residues), see Phobius details PF14331: IcmF-related_N" amino acids 158 to 378 (221 residues), 131.9 bits, see alignment E=1.4e-42

Best Hits

KEGG orthology group: K11891, type VI secretion system protein ImpL (inferred from 88% identity to azl:AZL_a01590)

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (1416 amino acids)

>MPMX19_03436 hypothetical protein (Azospirillum sp. SherDot2)
MDILGTVLTGIAQNQLWFFAALLLVVLVIIAVMAVILLRAGRRPAEPPPEVKALPAPESA
DPAVAPGTPGVPAALPIVGGRDLRRLFREGLAAYRETLSRNVYLVPWYLRTGVVPGDDGG
LLTCAEEVRPPVESKDRPFGFHWRFYDRAVVIDIDDARVAWKGVLDQLARHRVMMPADGV
ILTIPLEELEDVRRAAARGTELYARLWEIQRTLGLALPVYVVVTGCDAIPGFPLLAEALP
EPLRDGMLGWSSPYALETVFTPDVVGEALQSVAAGMLALQLEVFGAAAREDGAQIVALTD
RLTGTEAALRAMLGTAFKRTAYQETLYVRGLYFVGRTAPETPAVFGRDLLNRKIFPEAGL
PKPTRAFAATRTLRRHAWPVGTAVASAAAILLLWMGVHRVNTLSDQLVPILSDIPANLQQ
LSDQRAANQAGAPLPPTYADAAARFVQGMATLPQDPPFNPLPAAWISGVPDEVSRALAVG
YRRLTLATMRDVAEDRLRRLARDPLRVQIGAGEFDRLRAFAAEVGIAEGLARAYNTVDSR
DANMPLDEALEFSLGSAGARGFSARLHGWSVDMPPSGGAIPAPGPGAQRPIDLSAYRGDV
TRRFRQFADAYLRELAMSGLAVARLSVAANELELLAGGARTGADAATSYAEVLGSLDEAA
RGLNMERGAWIGTDGPVLPPEFDTLLTRLEKSELFGPSLRADIMELAQRRYDEAGSGGKS
LDSVIGRLLVQGPNGAPRLSPTAEGLRQTLTVWSARRFMRSGEASGTAAAPTNRAGWDRA
ALETIPPLLEDYLLFDAKEVPQAPQILRASMRAAAQHQLRRGVEQVLARALSGTPAGGTI
DRAGGLTQLRESARSLRLAFPVLAETMQSFRQIGLATPADAIRDIVARQANAVLAQADRM
LEEDQLYRPDARSLNAWIDGPLVPAQLFGQQSPTALALYLGNARQEVMALTREVAAPVVE
ILEKPVMGGGAASGLSAKWSRIVAEFDRYEGGRPNSTLAALEKFVTTDVAAIDAANCWDK
AQLDPQAGDFFASRLNELKQSIADRCRLMVDQRVYMGYAEIATAFNVSLAGRFPFGPVGE
NQADVAMVRAFYDAFDARQGYVIEGLRRSTRLGTAGHDALRFMETMALAKPALTAATVTD
QSGGLLLDPTFRVNRGREAGGTNIIEWKLSTPAGTIANIGARSPLRWYPGDRVVVSLRWA
KDGKLVPVAGVGASSSVDEATLTFAYEGPWALFALVRQHNAAQRDRPTNADTVLLFEAQT
RPVSAARDGEGREVEDKAGRDAPVSLSPTLRPGTPGLPSVPEAKRPDTRVFMALGAKRTV
VTDGKPPRDEKVALPELPSLAPLLASAGVMPRPGFPPAFPPNFPPSSSGTPPAGLTGFPS
AGFGGQPVNPTDRAFFDLQAPPGTPPLLRPANQRVY